Pseudomyrmex gracilis (graceful twig ant): 109862343
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Entry
109862343 CDS
T05003
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109862343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109862343
03041 Spliceosome [BR:
pgc03041
]
109862343
03036 Chromosome and associated proteins [BR:
pgc03036
]
109862343
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109862343
Spliceosome [BR:
pgc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109862343
Complex B
109862343
Complex C
U2 SnRNP specific factors
109862343
Chromosome and associated proteins [BR:
pgc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109862343
TFTC complex
109862343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
109862343
NCBI-ProteinID:
XP_020297961
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGSTKDYMVIGSDSGRIVILEYIPVKNIFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTVSSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAIGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQSLPAAAESLCIVEMGAKETDNSEDSAPQQ
SSLYLNIGLQNGVLLRMVLDPISGDLTDTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFAIHNDSAHLMIIETEHNAYTDDTKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLSEEPNEAVFGAPRAGPGLWASMLRIMAPTTGKTFEVHRFEQNLAALCLCLVKFTNQG
DQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNSEGTSIELQHKSLLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKSISGDLERT
PSEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatttatacaatctgactcttcaacgtgcgactggcatcacgcatgcggtgcatggc
aatttctccggcagcaagatgcaagagatattagtgtcacgtggcaaatccctggagtta
ctgcgaccggatcccaatacaggaaaggttcatactttgctgactgttgaagtgtttgga
atcattagatctcttatggcatttagattaactggcagtacaaaagattatatggttatt
ggatcagattctggtcgtatagtaattttggaatatattcctgttaaaaatatctttgag
aaggttcaccaagaaacttttggtaaaagtggttgtagacgtattgttcctggccaatat
cttgccattgatccaaaaggaagagctgttatgataggtgctattgagaagcaaaaactt
gtgtacattttgaacagagatgctgaagctcgtctaacagtttcctctccattagaagct
cataagagtaatactttggtttatcacacagttggtgttgatgtaggctttgaaaatccc
atgtttgcatgtctagaaattgattacgaggaagctgacagtgatcccacaggcgacgca
gcagtaaaaacgcaacaaaccttaacactatatgaacttgatcttggtcttaatcatgta
gtacgaaagtatagtgaaccgctggaggagcacgcaaactttcttgtttcggttcctggt
ggaaatgatggtcctagtggcgtgcttatctgttctgaaaattaccttacttacaagaat
ttgggtgatcaacatgatattcgatgcccaataccacgtcgacgtaatgacttggacgat
ccggagagaggaatgatatttgtatgttcggccacacataagacaaaaagcatgttcttc
ttccttgcgcaaactgagcaaggtgacatctttaagattaccctcgagacggacgaggat
atggtcactgaaattaagctcaagtatttcgatacggttcctgtagcggctagcatgtgt
gtgttgaaaactggatttctgtttgtggcttcggaatttggcaaccattatctatatcag
atagcgcatctcggcgatgacgatgacgagcccgaattcagttcggcgatgcccctggag
gaaggcgatacatttttctttgctccgcgacctcttcgaaatcttgtactagttgatgaa
atggacagtctttcgcctataatggcttgccaggtggcagatctggcaaacgaagatacg
cctcaattgtacatcgcctgcggtcgtggtccgcgatctactttgcgagtattgcgccat
ggtctcgaagtatccgagatggctgtaagcgaacttcctggcaatccaaacgctgtatgg
actgtgaaaaggagagtcgatgaggagtatgatgcatacatcatagtgtccttcgtgaat
gccacgcttgtactcagtattggggaaactgtcgaagaagtgacggactcgggttttctc
ggtacgaccccgaccttaagttgttccgccttaggtgaagacgcattggtgcaggtatat
cccgacggtatacgtcacatcagagcggataaacgcgtcaacgaatggaaggcgcctggc
aagaagacaatcgtgaagtgtgcggtaaatcaacgtcaagtggtgattgctctcactggc
ggagaactcgtttactttgaaatggatcctactggccaattgaacgaatacacggaaagg
aaaaagatgccatcggaagtaatgtgtatggcactcggaaacgttgccattggcgaacaa
cgttcgtggttcttggctgtcggcttgcaagataatacagtgagaataatatcattggat
ccgtcggactgtctagcaccaagaagtatgcagtcactaccggcagccgcggaaagtttg
tgtatcgtggaaatgggtgctaaagagaccgataattccgaagactcggcaccgcaacaa
tctagtttatatctgaacataggtttgcaaaatggtgtgttgctcagaatggtattagat
ccaatttcaggcgatctcacagacacgagaactcgctatctagggtcacgcccggtaaag
ctctttaggatacgaatgcaaggcaatcaagcagtattggcaatgagcagccgatcgtgg
ttaagctattatcatcagaatcgttttcacctgactcctctatcctacgagagtttggag
tttgcctcgggctttagctcagaacaatgtcctgaaggtatcgttgcgatctcaacaaat
acactaaggatcttagcgttggagaaactcggagcagtgtttaatcaagtgagctttccg
ttggagtacacaccgcggaagttcgcgatacacaacgattccgcacatctaatgattatc
gagaccgagcataacgcgtatacagatgatacgaaacagcaaagacgactgcagatggca
gaagagatgcaggaggctgctggagctgaagaagctgctgtcgctcgcgaattggcggaa
gcgtttctatcagaagaaccgaatgaagcggtttttggcgctccacgagccggtccgggt
ctgtgggcttccatgttgagaataatggcgccgactactggcaagacgttcgaagtacac
cgcttcgaacaaaatttggctgcattgtgtctttgtctcgtcaagtttactaatcaagga
gatcagctatttcttattgttggagtggctaaggagttccaactgaatcctcgagtcagc
aacggtggatttctttacacatacaaagtaaattcagaaggcaccagcatcgagctgcag
cataaatccctactagacgaagtacctttagccatttgtccatatcaaggccgcgtttta
gtcggtgtaggaagaatgctgcggctttacgatatgggtaagaagaagttattgcgaaag
tgcgaaaacaaacacatccccaatgccgtggtctcaatcaatgctattggtcagcgtatc
tatgtcagtgatgtgcaagaatccgtgtacgctgtgagatacaagcgtcaagagaatcaa
ttgattgttttcgcagacgacacgcatccaaggtggatcacgaccacgtgcgtgttggat
tacgataccgttgctaccgccgacaaatttgggaacatagctgtgatacgactggcatct
ggcattaatgatgatgtggatgaagatccaaccggtaataaggcactgtgggaccgcggg
ttactgaacggtgcgagtcagaaagcggacacagttgcttgttttcacgtcggtgagacg
gtaatgtcgttgcaaaaggcaactctcatacccggtggttccgagagtttagtctacaca
actctcagcggcacggtgggcgtgctggtgccgtttactagtcacgaagatcacgatttt
tttcagcatctggagatgcatatgcgatccgagcacccgccgttgtgcggtcgcgatcat
ttgtctttccgatcatattattatcctgtaaaaaacgtaattgacggcgatctctgcgag
cagttcaactcgatcgagcccaccaaacaaaaaagtatttccggcgacctcgagagaaca
ccgtccgaagtgtcgaaaaaactcgaagatatacgtacccgttatgcgttttaa
DBGET
integrated database retrieval system
