Pseudomyrmex gracilis (graceful twig ant): 109862345
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Entry
109862345 CDS
T05003
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgc03000
]
109862345
04121 Ubiquitin system [BR:
pgc04121
]
109862345
Transcription factors [BR:
pgc03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109862345
Ubiquitin system [BR:
pgc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109862345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
DBD_Tnp_Hermes
zf-C2H2_12
hAT-like_RNase-H
MULE
zf-C2H2_7th_ZNF462
OrsD
Motif
Other DBs
NCBI-GeneID:
109862345
NCBI-ProteinID:
XP_020297963
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MAPLKSIWWKYFIKNGDVATCRICNKILKTSGNTTNLKSHLQKNHPKIESHTISRNKENK
QQENQTTNSDNPESESSESRRKKARITTLAIKENDEPSLTSNSSSSSININMVCKEPKVQ
QTVKESFQNICAYKEGGEKSRKLLDSILFMIVKDCQPFSIIENTGFKKVIATAAPYYELP
SRFTIKRKIENKFDILSALFTEKLKLMTSCTLTTDIWTDTMQTRSFLGITIHFGVGSELY
SATLGVYDLKERHTGEYIAEKLVETCNEWNIQKDQVTAVVTDSAANMIKAVTIAFGAKKH
IPCFAHMINLVCTKALRKNENINELLIKVKTIVTWFKQSVVASDELRKATTKETKLIQEV
PTRWNSTLYMLERFLELRRAVNDIVNRHVEAPPMITAKEIEIITEICDLLKPLEAATKQI
CGEKYVTSSIIIPMVRCLQSKIDKLHPKHVEGIQLREDLLCEIKTRFDHIEHVQILALST
LLDPRFKKLHFKDILACSKAQAVLKTLIAESITHSDDLSFTESTSDSDQSNASGFSLWSD
HHKLVQNTWNKTKSNDLDTENMPSEITLYMRAPVGRLGDNPLEMWXEMSSTYVYLSKIAF
KYLTVVGSSVPSERLFSKAGIILTQQRNKLKGKILSKLLFLHSLDEKWWSI
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacttaaaagtatatggtggaaatattttattaaaaatggcgatgtggctact
tgtcgaatatgcaacaaaattctgaaaacctcaggaaatactactaatttaaaaagtcat
ctacaaaagaaccatcctaagattgagagtcatactatatctcgtaacaaagagaacaaa
cagcaagaaaatcaaactacaaattctgacaatcctgaaagtgaaagttcggagtcgaga
agaaaaaaagcacgaattactacattagctataaaagagaatgatgaaccatccttgact
tctaattcatctagttcatcaatcaatattaatatggtttgtaaagaacccaaagttcaa
caaaccgtaaaagaatcattccagaatatatgtgcttataaagaaggaggagaaaagagt
cgtaaactattagattctatactatttatgattgtgaaagactgtcaacctttctctatt
attgaaaatacaggatttaaaaaagttattgcaactgctgctccttattatgaacttcca
tctcgatttacaataaaacgcaaaattgaaaataaatttgacattctgtcagctctgttt
acggaaaaattaaaattaatgacgagttgtacgttaacaacggatatttggacggataca
atgcaaacacgaagttttcttggtattacaattcattttggcgttggaagcgagctctat
tctgcaacgttaggagtttatgatctaaaggaaagacatactggggagtatattgcagag
aaacttgtagaaacctgtaatgaatggaatattcaaaaggatcaagttactgcagttgta
actgacagtgcagcgaacatgatcaaagctgtgactattgcatttggtgcaaaaaaacat
attccttgctttgctcacatgataaatttagtgtgtacaaaagctttgagaaaaaatgaa
aatataaacgagttacttattaaagtaaaaacgatagtgacgtggttcaaacaatctgta
gtagctagtgatgaacttagaaaagctaccaccaaggaaacaaaactgattcaagaagtc
cctacaagatggaactctactttgtatatgcttgaaagatttttagaacttcgtcgggca
gtaaatgatatcgtgaatcgtcatgtggaagcaccacctatgattactgctaaagaaatt
gaaataataacagaaatatgcgatttattgaaacctttagaagcagcgacaaaacaaata
tgtggtgaaaaatatgttacaagtagcataataattcctatggttcgctgtttgcaaagt
aaaatagacaaattacatcctaagcatgtagaaggaattcaactacgagaagatttgtta
tgcgagattaaaacacgttttgatcacatagaacatgtacagattttagcgttgtcaaca
ctgttagatccccgctttaaaaaacttcattttaaagatatactagcatgttctaaagca
caggcagttttaaaaactctcatagctgaaagcataactcattcggacgatttatcattt
acagaatcaacatccgactcggatcaatcaaacgcaagcggattttctttatggagcgat
catcataagcttgttcaaaatacgtggaataaaacaaaatcaaacgatttagatacagaa
aatatgccgtcagaaatcactctttatatgagagcacctgttggtcgacttggagataat
ccgttagagatgtgganagagatgagttccacgtatgtttatttatccaaaatagcattt
aaatacttaacagtagtgggatcatctgttccttctgaaaggcttttttcaaaagctgga
attattttaacgcagcaacgaaataaattgaaagggaaaatattatcaaaattattattt
ttacactctctagacgagaaatggtggtctatataa
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