Pseudomyrmex gracilis (graceful twig ant): 109862708
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Entry
109862708 CDS
T05003
Name
(RefSeq) poly(A) polymerase type 3 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109862708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109862708
Enzymes [BR:
pgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109862708
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
109862708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Polbeta
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
109862708
NCBI-ProteinID:
XP_020298413
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MWQTQSNSSTPNSISNEKNNLRTLGMTSAISIAEPKPIDITRTNELKEALKPYNVFESEE
ELNHRMEILSKLNALVKQWIRNTSIARNMPPNVADQVGGKIYTFGSYRLGVHHKGADIDA
LCVAPRHIYRSDYFTSFFELLKMQKEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLK
EIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGI
YSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLG
YPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIMGKA
TWDKLFEPPNFFGKYKHYIVLLAKSLSAEDQLEWCGLVESKIRHLIGTLERNPHIVLAHV
NPEAFPPLEPELGKHCSMWFIGLAFARSESLNIDLTFDIKSFVDTIERQAEQINMMKIGM
QVEAKHVKRKDLHTFVPPNLLKREKKCKNNLQTSSTIHRNGSIGNSGSVSPRNPKESDGG
ITNVNRKRLSDDQLEPNGKKRRMNENAEEQPENTFTENTEDSNSGYMDEYKPNLPVKKEV
RHSCNKDVRFIHTTHKKYFVERNQNIS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagacgcaaagtaatagttcaactcccaattctatatcaaatgaaaagaacaac
ttgcgtactttaggtatgacatctgctattagtatagcagaacctaaacctattgatatt
accagaaccaacgaattgaaagaagctttaaaaccctacaatgtttttgaatcggaagaa
gagttgaatcacaggatggaaattttgagtaaattaaacgcattggttaaacaatggatt
agaaatacaagtattgctagaaatatgccaccaaatgtggcagaccaagttggtggtaaa
atatatacatttggatcatacagattaggtgtccaccataaaggtgctgatattgatgct
ttgtgtgtggctccccgtcatatatacagatccgattactttacatcgttttttgaattg
ttgaaaatgcagaaagaagttacggatttgagggcggtagaagaggcttttgtaccagtc
ataaaaatgaattttgatggtatagaaattgacatgctatttgcaaagttaacactcaag
gaaattccagattcaatggatctcagagacgatatgttgttaaaaaatcttgatcagaaa
tgtgttcgaagtctcaatggatgtcgagtaacggatgaaatattgcgtttagtacctaat
atagagaatttcagattagctcttagggctataaagttatgggccaaaagacatggtata
tacagcaatgtcttgggttatcttggtggtgtatcgtgggcaatgttggttgcgcgaact
tgccagctttatcccaatgcagtagctgctacactaatagaaaaattttttctcgtattt
tctcaatggaaatggccacaaccagtacttttaaaacaacccgataatgttaatctgggt
tatccagtttgggatccaagagtaaatgtatcagacagatatcatttgatgccaataatt
acaccagcatatcctcaacagaattctacttttaatgtgtccgtgtcgactagaacaatt
atgcaagaagcattcgaaaacggactagctataacagaagagattattatgggtaaagca
acgtgggacaagttgtttgaaccacccaattttttcggaaaatacaagcattatattgta
ctgttagctaaaagtttaagcgcagaagatcaacttgaatggtgcggccttgtcgagtca
aaaatacgacacttaataggtacgttagaaagaaatcctcatattgtcctggcgcacgtt
aatccggaagcgtttccaccgttggaacctgaactgggcaaacactgttctatgtggttc
attggcctagcgtttgctagaagtgaaagtctcaatattgatctcacattcgatattaaa
tcctttgtggatacaattgaaagacaagctgaacaaataaacatgatgaaaataggaatg
caagttgaagctaaacatgtaaaaaggaaggacttgcatacttttgttcctccaaatttg
cttaaacgagaaaagaagtgtaaaaacaatttgcagacttctagtaccattcatcgaaac
ggaagcatcgggaacagcggtagcgtgtcgccgcggaatccaaaggaaagtgatggcgga
attacaaatgtgaacagaaaaaggttatcagatgatcagctcgagccgaatggaaagaaa
cgccgaatgaatgagaacgcagaggagcaaccggaaaatacgttcacagagaacacagaa
gatagcaattctggttacatggatgaatataaaccgaacttgccggttaagaaagaagta
agacatagttgcaacaaagacgtaagatttatacatactacacataaaaaatattttgta
gaaagaaatcaaaatatttcttaa
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