Pseudomyrmex gracilis (graceful twig ant): 109863423
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Entry
109863423 CDS
T05003
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03030
DNA replication
pgc03410
Base excision repair
pgc03420
Nucleotide excision repair
pgc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109863423
03410 Base excision repair
109863423
03420 Nucleotide excision repair
109863423
03430 Mismatch repair
109863423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgc03032
]
109863423
03036 Chromosome and associated proteins [BR:
pgc03036
]
109863423
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109863423
DNA replication proteins [BR:
pgc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109863423
DNA Replication Termination Factors
ELG1-RFC complex
109863423
Chromosome and associated proteins [BR:
pgc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109863423
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109863423
Check point factors
HRAD17(Rad24)-RFC complex
109863423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rep_fac_C
AAA_lid_RFC1
AAA_16
Rad17
AAA_30
AAA_14
RuvB_N
DUF815
AAA_22
AAA_11
AAA_2
AAA_5
AAA_24
AAA_7
Gp44_lid
AAA_assoc_2
DNAX_ATPase_lid
Mg_chelatase
AAA_19
bpMoxR
SLFN-g3_helicase
TniB
ResIII
NB-ARC
ATPase_2
RNA_helicase
AAA_28
AAA_3
Bac_DnaA
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
109863423
NCBI-ProteinID:
XP_020299277
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MQAFLKTGKLCASDLKKSSTSRVKDDKKNLTPWVEKYRPKNVDDIVEQTEVVHVVRQVME
RGDFPNMLFYGPPGTGKTSIIHAAARQMFGSIYRDRILELNASDDRGIQVVREKIKSFAL
RRANPTGPDGKKYPPFKIVILDEADSMTDAAQTALRRIIEKEALSTRFCLVCNYLSRIIK
PIASRCTKFRFKPLSNEKSISRLEYICNEENLKADRNVLEKIVKASSGDLRQAVMCLQSI
TRLKGKDHEIMVDDALDVIGLVPDENIDALWETCKKGSYNTIQKLLEDLLLEGYPGLQII
DQLNEKIIFSDELTDKQKMLIGDVLGVRNHFCLHFKS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtttctgaagactggaaaattatgtgcttcagatcttaaaaaatcatcgacc
tcacgcgtcaaagatgacaagaagaatctcacaccatgggttgaaaaatatagaccgaaa
aatgttgacgatattgtggaacaaacagaagtggtacatgttgttaggcaagttatggaa
cgtggagactttcccaacatgttattttatggaccaccaggtactggtaaaaccagcatt
attcacgcagctgcaagacaaatgtttggtagcatatatagagacagaatattagaactg
aatgcctctgatgacagaggtatccaagttgtgagagaaaaaatcaagtcctttgcacta
agaagggctaatcctactgggccagacggaaaaaaatatccaccctttaaaatcgttatt
ctggatgaagcggatagcatgaccgatgctgctcagacggcacttcgtcgaatcatcgaa
aaagaggctcttagtacacgtttctgtctggtgtgtaattacttgtcccggattatcaaa
ccaattgcatcacgctgcaccaagtttcgatttaagccgcttagcaatgaaaagagcatc
tccaggctagagtacatatgtaacgaggagaacctaaaagctgatagaaacgttttagag
aaaattgtcaaagcgtcaagcggtgatttaagacaagctgttatgtgtcttcagtctatc
acccgattaaagggtaaggatcacgagatcatggtcgacgacgccctcgatgtaattgga
ctggtccctgatgaaaatattgatgcattgtgggagacttgtaaaaaggggagttacaat
actattcagaagctacttgaagacttattattagaaggatatccaggtttgcagataatc
gaccaattaaatgagaagatcattttctccgatgaacttactgataaacaaaaaatgttg
attggcgacgtgcttggcgtaagaaatcatttttgcttacatttcaaaagttaa
DBGET
integrated database retrieval system
