KEGG   Pseudomyrmex gracilis (graceful twig ant): 109863807
Entry
109863807         CDS       T05003                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pgc03041]
    109863807
Spliceosome [BR:pgc03041]
 Complex B
  Other components
   Complex B specific factors
    109863807
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th LisH_TPL Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IP5PC_F PROPPIN WD_LRWD1 WD40_like DUF7165 VPS8_N LisH_WDR26 zf_topless
Other DBs
NCBI-GeneID: 109863807
NCBI-ProteinID: XP_020299963
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMAFSRDSEMLAGGGQDGKIKVWKVQSGQCLR
RFEKAHTKGVTCLQFSRDNSQILSASFDTTIRIHGLKSGKTLKEFRGHSSFVNEVVFSPD
GHNIISASSDGTVKIWSLKTTECIGTYKSLGAADLTVNSIHPLPRNLEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVCTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLAHHPHQNLLCSYSEDGLLKLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaatcgaatctgccgatgtgattcggttgatacaacagtatcttaaggaa
tcaaatctcgtgaagacgctgcaaaccttacaggaagaaacaggtgtgtcgctgaacact
gttgacagcgtagatggttttgtagctgacataaacaatggccactgggacacggtttta
aaagcaatacaatcactcaaactgcctgacaaaaaacttatagacttgtacgaacaggtt
gttctagaattaattgaattgagagaattaggtgcggcgcgttcgttattgagacagact
gatcctatgattatgatgaagcagcaagaacctgagagatacattcacttagaaaatctt
cttgcacgttcgtattttgatccacgtgaagcttatcctgatggaagcaccaaggaaaag
cgaagagcttatatagcaacggctcttgctggcgaagtgtcagtcgtaccttccagtaga
ttgctcgctttgttgggacaagctctgaaatggcaacagcatcagggtctactgccgcct
ggcaccacgatagatctgttcagaggaaaagcggcggtgcgcgatcaggaagacgagaaa
tatccgacgcagttatcgaagcaaattaaattcggccaaaaatcgcacgtggagtgcgca
cgtttttcgcccgatggccaatacctggtgaccggttcggtggacggtttcattgaggtg
tggaactttacgactggtaaaatcagaaaggacttgaagtaccaagcgcaagacaatttt
atgatgatggagcaagcggtgctttccatggcgttcagtcgcgacagcgaaatgctcgcg
ggtggcggtcaggacggcaagattaaagtctggaaggtgcagagcggacagtgtctgaga
agattcgaaaaagcgcatacaaaaggagtgacttgcctgcagttcagcagggataacagt
cagattttatcggcctcgtttgacaccaccataagaatacacggcctcaaatccggcaag
actctcaaagaattccgcggccactcatcgttcgtaaatgaggtcgttttttctccagac
ggtcataatattatcagcgcgtcctcggatgggactgttaagatttggagtttaaagacc
accgagtgtataggcacgtacaaatcgttgggcgccgccgatcttacggtgaacagcata
catccccttcctcgaaatctggaacacttcgtcgtgtgcaatcgttcgaacacagtagtg
atcatgaacatgcaaggtcagatcgtgagatcgttctcgagcggtaaacgagaaggcggt
gactttgtttgcacggtggtgagtccgcgcggcgaattcatctactgcgtcggtgaggat
ctcgtactgtactgcttctccacgtcatcgggaaaacttgagagaactctcaacatacac
gaaaaagatgtcataggtttggcgcatcatccccatcaaaatttgctgtgttcttacagc
gaggatggtttgttaaagctatggaaaccttaa

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