Pseudomyrmex gracilis (graceful twig ant): 109863871
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Entry
109863871 CDS
T05003
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109863871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109863871
03016 Transfer RNA biogenesis [BR:
pgc03016
]
109863871
Enzymes [BR:
pgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
109863871
Messenger RNA biogenesis [BR:
pgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
109863871
Transfer RNA biogenesis [BR:
pgc03016
]
Prokaryotic type
tRNA degradation factors
109863871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
Motif
Other DBs
NCBI-GeneID:
109863871
NCBI-ProteinID:
XP_020300108
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MIVFTSSRLSRFRKPVFLACKSLYKNENVFYVRFSTNAGKEIATLSDGKQLILSTGKYAR
FADGSAVVSLGDTSVMVTAVSKHQSSSNSSFLPLVVDYRQKAAAAGRIPTNFLRRELGPT
EREILTSRVIDRSIRPLFPEGFYFDTHVMCNMLAVDNMNDPDVIAINGASTALSVSDIPW
DGPVGAVRVGMIDNDIIINPTRRQIQDSILNMIITATKHNLIVMIEGSANDILEQDLKKA
IKLGVKECQTIVASITNLQKMYGKPKRKIEINEQDNDESLISSVKELAETKLREIFLDHT
HDKISRDNAVSDVRNNVIETLKNDNANLNITLVEKIFGTISKDIFRQLILEKEIRCDGRS
LTDLRNITCEVDLFNPLHGSAVFQRGQTQVMCTVTLDSLESALKMDAVSMLISGVKEKNF
FLHYDFPPYATNETGRVGRIGRREMGHGALAEKALQPILPKDYPFAIRLTSEVLESNGSS
SMATVCGGSLALMDAGVPISSPAAGVAIGLVTRYNETKTDIEDYKILTDILGIEDYLGDM
DFKIAGTKRAFTALQADVKIPGVPLKIIMECIHQATVAKSEILKLMNNVLREPRSTKRDK
MPIVENIQIPIHQRGKFLGVGGINLKKILLETGVHINPHDEETYYIFAPNESAMAEAKEM
IENILQKDREPTLEFGGIYKAKIVEIRETGVMVTLYSNMVPTFLPNSQLDQCVIHHPSAL
GLEIGHEIKVKYFGRDPVSGQIRLSRKVLQQPTKVVRSLHREEENG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgttcacaagttcaaggttatcgagatttcgtaagccagtgtttttagcttgc
aaatctttgtataaaaatgagaacgtattttacgtgaggtttagcacaaatgcgggcaaa
gaaatcgccacgttatccgatggcaagcagctcatcttatctacaggaaaatatgcacgt
tttgctgatggtagtgctgttgtatctctgggtgacacttctgtcatggtcacagcggtc
agcaaacatcagtcgtcatccaattcctcgtttcttccgctcgttgtggactatagacaa
aaagcagcagcagctggtcgtatcccgaccaatttcctacgaagggagcttggaccgact
gaacgcgaaattctcacaagtagagtaatcgatcggtcaataagacctttatttccagaa
ggattttattttgatacacacgtgatgtgcaacatgttagctgtggacaatatgaacgat
cccgatgtgatagccattaatggtgcttctacagctcttagcgtttccgatattccgtgg
gacggtcctgtgggcgctgtcagagtaggaatgatcgataacgatattataatcaatccc
acaagacgtcaaatacaagatagtatattaaatatgattatcaccgcgaccaagcacaac
ttaattgtcatgatagagggttcggcaaatgatatattggagcaagatctcaagaaagcg
ataaagctcggtgtgaaagaatgccagaccatcgtagcctcaataacaaatttgcaaaag
atgtatggaaaaccaaaaagaaaaatcgaaatcaacgagcaagacaatgacgaaagtctg
attagttccgtgaaagaactcgcggagacgaaattgcgagaaatatttttagatcacacg
catgacaaaatttccagagataatgctgtttctgatgttagaaataatgttattgaaacg
ttgaaaaatgataacgcaaatttgaacattacattagtagaaaaaatcttcgggacaatt
agtaaagatatctttaggcaactgattttagagaaagaaattagatgcgacggtcgttct
ttgactgacttacgcaatataacgtgtgaagtagatctctttaatcctcttcacggttcg
gctgtgtttcaaagaggtcaaactcaggtcatgtgtactgtaactctggattccttggaa
agcgcccttaaaatggatgctgtttcaatgctaattagtggtgtgaaagagaagaatttc
tttctccattatgattttccaccctatgcgactaacgaaacggggcgggtaggtcggata
ggtcgccgggagatgggacatggcgctttggcagagaaggccctgcaaccgattcttcct
aaggactatccctttgccataagactgactagtgaagttttagaatcaaatggttcttcc
tcaatggctaccgtttgcggtgggagtttagcacttatggatgcgggtgtaccaatatct
tcgccagcagcgggtgtagctattggtcttgtgactaggtacaatgaaactaaaacagat
atcgaagactataaaatattaactgacatattgggaatcgaagattatcttggcgatatg
gatttcaaaatagcgggtaccaagcgagcgttcactgctctgcaagctgatgtgaagata
ccaggagttccgctaaaaattattatggagtgcatacaccaagcaacagttgctaagtca
gagatcttaaaacttatgaacaatgtgttgcgggaaccgcgatcgactaaaagggacaaa
atgccgattgtcgagaacatacaaattcctattcatcaaagaggaaagtttcttggagtc
ggtgggataaatctgaaaaaaattctattggaaactggagtgcacataaatccacatgat
gaggaaacgtattacatttttgcgccgaacgaaagtgccatggctgaggcaaaagaaatg
atcgagaatattctgcaaaaagatcgcgagccgacattagagttcggtggtatatataaa
gcaaaaatagtcgaaattcgagaaactggcgttatggtaacgttatattccaacatggtg
cccacatttttgccgaactctcagttagatcagtgcgtgattcatcatccgagtgctcta
ggtcttgaaataggtcacgaaataaaagtcaaatactttggtcgagatccggtatccggg
cagattaggttatcgcgaaaagtgttgcagcaacctacgaaagttgtgagaagtttgcat
cgcgaagaagaaaatggataa
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