Pseudomyrmex gracilis (graceful twig ant): 109863900
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Entry
109863900 CDS
T05003
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109863900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109863900
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109863900
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109863900
RNA polymerase I system
109863900
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
109863900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW
KOW2_Spt5
KOW6_SPT5
KOW7_SPT5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
CTD
SH3_KIN17_C
Motif
Other DBs
NCBI-GeneID:
109863900
NCBI-ProteinID:
XP_020300157
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MSDSEGASDVGSDGRRSRSRSSGARSMGSRSPSRSRSRSRSPSGSEDGDHKMDEAEEVRS
GDEEGVEPEEEPEGEDLGSTSEYDEEEEEEDDRPRKKSKRGGTFSTFIIDEAEVDDEVED
DDEWEEGAQEIGIVGNEVDELGPTAREIEGRRRGTNLWDTQKEDEIEEYLRKKYADESIA
ARRFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKSTVLLLMRKFITYQFSNEPL
QIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKEQ
TGLKAKQWVRLKRGIYKDDIAQVDYVDLGQNTVHLKLLPRIDYTRPRGALRTAQSESEAL
KRKKKRRPVAKPFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKGFTASAIISEGVK
PTLSELEKFEEAPEGVEIDVSGTPGTGVSGKEDQAVTHSFSNGDNVEVCEGELINLQGKI
VSIDGNMIMVMPKHEELKEALEFQASELRKYFTQGDHVKVVAGRYEGDTGLIVRVEPNRV
VLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRLERENFHV
LSMHGKVVEARPQGLTKRREHRNAVALDSQQNTIQKKDIVKVIDGPHAGRGGEIKHLYRS
FAFLHSRMFVDNGGIFVCKTRHLQLSGGNKTSSINSMLPVTGYMSPRIASPMHPSGGGFG
RGGGAGRGRGRGGGGARRDRELIGTTIKITGGPYKGNVGIVKDATETTARVELHSTCQTI
SVDRSHIANVGVPTKDGGFSSYNRTPAYGAGGQTPMYARDGSKTPMHGNQTPMYENGSRT
PHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGYAPGYPPTGGPF
TPQTPGTMYGSEQSFSSYQPSPSPGGSATASPSPAGYVATPSPSGTGYTTSPHGAFATPS
PMGYSPMTPGVAGSPYNPSTPGSGLDPINTGIGGSDWHTTDIEVRIRDSHDDPALAGQTA
IIRGISGGMCTVFLPNEERVVNLMCEQLEPVVPSRGDRVKVILGEDRESVGTLLSIDNQE
GVVKLNTEEIKFLQLRFLCKMKSS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactctgaaggtgccagtgacgtcgggagcgatggtagaagatcgcgaagtcgt
agtagcggagcgcgaagtatgggctcgaggagtccatccagatctcgatcgcgttctcgg
tcgccgtctggctctgaggacggagatcataagatggatgaagcagaagaagttaggtcg
ggagatgaagaaggtgttgaaccagaagaagaacctgaaggagaagatttaggaagcact
agtgagtatgatgaagaagaagaggaagaagatgatagaccgagaaaaaagagtaagaga
ggtggtaccttcagtaccttcatcatagatgaagcagaggtagatgacgaagtagaagat
gatgatgaatgggaagaaggagcgcaagaaatcggcattgttggaaatgaagtggacgaa
ttaggtcccacagcgcgagagatcgagggacgacgaagagggacaaacctttgggatact
cagaaagaagacgaaatcgaagaatatcttcgaaaaaaatatgctgacgaatctattgcc
gctcgtcgtttcggcgatggcggtgaggaaatgagcgacgaaatcacacagcaaacttta
ttgcctggtgtgaaagatcccaatctatggatggtaaaatgccgaataggagaagaaaag
tctactgtactcttgctgatgcgaaaatttattacttatcaattttcaaatgaacctcta
cagataaaatctgtcgtggcacctgaaggtgtgaagggttatatttacatagaagcttac
aagcagccacacgtaaaagctgctatcgaaaatgttggaaatctcaggatgggtatatgg
aagcagcagatggtacccatcaaagagatgacagatgtgttgcgagtggtcaaagagcag
acaggtttaaaggccaaacagtgggttcgcttgaaacgaggaatttataaagatgatata
gcacaagttgattacgtcgatttggggcaaaatacggttcatttgaaattgttgccgaga
atcgattacaccagaccccgtggtgcattgcgaacagcacagagcgaatccgaggcgtta
aaacgcaagaagaagagacgaccggtagcaaaaccgttcgatccggaagcaattcgcgca
attggtggagaagtcaccagcgacggtgatttccttatctttgaaggaaatagatacagt
cgtaaaggatttctctataaaggattcaccgcaagtgctattatttcggaaggcgtcaaa
cctactctttccgaattagagaaatttgaggaagcaccggaaggtgttgaaatagacgtg
agcggaacaccaggaaccggagtttctggaaaagaagatcaagctgtaactcattctttt
agtaacggcgataacgtagaagtgtgcgaaggtgaattgataaatctgcaaggaaaaatt
gtttccatagacggaaacatgattatggttatgcccaaacacgaggaacttaaagaagct
ttggaattccaagcttcggagttacgaaaatacttcacacaaggcgatcatgtcaaggtc
gtagcgggaagatatgaaggtgatactggcttaatcgttagagttgaaccaaacagagtt
gttttgttttctgacttatcaatgcacgaactcgaagttctcccgagagatttacaattg
tgttcggacatggccactggtgttgacagtttgggacaatttcaatggggcgacttggtt
cagcttgatgcgcaaacggttggcgtcatcgtgcgattggaacgcgagaattttcatgtg
ctctccatgcacggaaaagttgttgaagcaagacctcagggtcttacaaaacgtcgggaa
catagaaacgcagttgctttagattcacagcagaacacaatacaaaaaaaggatatcgtt
aaagtaatcgacgggccacatgcaggtcgaggcggtgaaataaaacacttgtacagaagt
tttgctttcctgcattcacggatgttcgtagataatggtggaatatttgtgtgcaaaact
agacatttgcaactttctggtggaaacaagacaagttctataaactctatgttaccggtc
acaggttacatgtctcctagaatcgcttctcctatgcatccgagcggaggtggttttgga
cgaggtggtggagctggaagaggcagaggtcgtggtggcggcggcgcgagacgcgacaga
gaattaatcggaactactattaaaataacaggaggaccgtacaaaggtaacgtcggcatt
gtgaaggacgcgacggagacaacagctcgcgtggagctgcattccacgtgtcagacgatt
tctgtcgatcggtctcacatagcaaatgtcggcgtcccgacaaaagacggtggcttcagc
agttacaacagaactccggcttacggagccggtggacagacaccgatgtacgcaagagac
ggatcgaaaacacctatgcacggcaaccaaacacctatgtacgaaaatggctctcgtact
cctcattacggttcgatgacaccgtctcacgatggttcgcgcacgccaggacaatcagga
gcctgggatccggcagttactaatacacccgccagaacaaacgacttcgacggctacagt
atggaagaaggcggctcgccaggttatgcacctggatatcctcctaccggaggtccattt
acaccacaaactccaggcaccatgtacggctcggaacaaagcttcagttcgtatcaaccg
agtcctagtcctggaggtagtgcaaccgcaagtccaagtcctgcgggttatgtggctacc
ccgtctccaagtggcaccggctacactaccagcccacacggagcattcgccacaccttct
ccgatgggttacagtcctatgacacctggagtggcaggtagtccatataatccgtcgaca
cctggttcaggattagatccaatcaatacaggcataggtggttcagattggcatacaaca
gatatagaagtacgcattcgcgattcgcacgatgatccagcgcttgctggacagacagct
atcattcggggaatttccggcggtatgtgtactgtttttctacctaatgaagaacgtgtc
gtgaatttaatgtgcgaacaactggaacctgtggtaccgtcacgaggtgatcgagtgaaa
gtgatcctaggtgaagatcgtgaatctgtaggcactttactctccattgacaatcaagaa
ggtgtagtgaaactcaacacggaagagattaaattcttgcagttgcgatttttgtgtaaa
atgaaatcgtcgtaa
DBGET
integrated database retrieval system
