Pseudomyrmex gracilis (graceful twig ant): 109863996
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Entry
109863996 CDS
T05003
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013
Nucleocytoplasmic transport
pgc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109863996
03015 mRNA surveillance pathway
109863996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109863996
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109863996
mRNA cycle factors
P-body specific factors
109863996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
SHPRH_helical-2nd
Motif
Other DBs
NCBI-GeneID:
109863996
NCBI-ProteinID:
XP_020300337
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
MSEVTNEAAVAEKAESVEDPNAVSEEDKQYLMEYVRETEQRIKTKEDIRAANLNPIRPPE
ASFSKLDSSLKRNTTFVKKLKNFSVTQLDTVLKDMTNLNLTKYISEVASALVDAKIKMTD
VGPAIRICSFLHQTYAEFSTHFFENWQRILSFKIGDKIANPSKLRVDLRFYAELVNAGIF
THKQGLPLLGSILTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPRKVRELSEKLNVSI
PKSKLLSPDKQQNVRLLLREYYNSLCKHMLKEHKELQAFEKQNRKILQTRGELSSERKEK
LEALQVSYERLLSSVQSFSDTLDEPMPELPVDNETKAEAEESLKMINEGEDNSLLEDMWG
DEETRLFYEDFPDLRVFLPGSYLKETAKDTFKDTPLTEDALDEEIILDELEETEKVEEPE
PEVEEPQVTNTSNKIMLDAFLTQLPNCVNRGMIDNAAINFLMNLNTKYNKKKLVKALFGV
SRIRQDLLPFYSRLAAILYPVMPEIGNDLCQMLKQDFKYHVRKKDQINIESKIKVVRYIG
ELVKFKLYSKIEALYCLKVLLQDFTHHHIEMTCNLLEICGRYLFCSPDSHQRTKVYLEQM
MRKKAVTALDSRYVTIIENAYYFVNPPESTIGVAKKDRPPMHEFIRKLLYQDLSKTNTDK
VLKLMRKLDWEDESVSSYAIKCLTAAYNVKYPNIRCMGSLLAGLVAHYETIGPQVVDGVL
EDIRLCMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVTMDHSIPST
LDPSDHLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLVFFQSYFWFKYTDSFWTTENPFP
FDIDYMYRDTLTMLRPKMQLFQSYKEAQCAIEELRNVLYPGLGYPVDDTEGENDMSVIME
GDEEAAVTGNGSGDAKGIADLHFEEPEDCSEAQSEEEWTADAERDDAMGTQENTQGDRSQ
SLSAEGGTEVIIDVNEELNAALPSKPRRLSCPEDDDFLSALDKMVSDNIQDRMRDSVKPQ
QVDISVPLHVKSTKKTYEQLQERPSDNSTVDFVLMLRKGNKQQYKNLAVPVSSELAMNLR
NREQEQKEEKERVKRLTLNITERQEEEDYQETMNQSTRPVTVNLNRERRQKYNHPKGAPD
ADLIFGPKKIR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggttacaaatgaagctgcggtagctgagaaagcggagagtgttgaagatcca
aatgccgtttcagaagaagacaaacaatatttgatggaatatgtaagagaaacggaacaa
agaatcaaaacaaaggaagacattcgtgcagctaatttaaatcctataagaccaccagaa
gcgtcatttagcaaacttgattcaagtctcaaaagaaacactacttttgttaaaaagcta
aagaatttcagcgtaactcaacttgacactgttctaaaagacatgacaaatttaaactta
accaaatacataagtgaagttgcttctgctctggtagatgccaaaataaaaatgactgat
gttgggcctgccattcgaatatgcagttttctccatcagacatatgctgaattttctact
catttctttgaaaattggcagagaatattgtcttttaagattggtgataaaatcgcaaat
cccagtaaattgcgagttgatcttcgattttatgcagaattggtgaatgcagggatattt
acacacaagcaaggtttgccactgcttggttcaatattaacagtattaatcaatatggac
aaagaggagcacaacaatgccagcataatattgagcttttgtcgacactgcggtgaagat
tatgccggtctcgtgcccagaaaagtaagagaattgtcagaaaaattgaatgtttcgatt
cccaagagcaagctattgtcgccagacaagcaacaaaatgtcagactattgctgagagaa
tattacaactctttatgcaagcacatgcttaaagagcacaaagaattgcaggcattcgag
aagcaaaatcgcaaaatattgcaaactagaggtgaattgagttcggagaggaaggaaaaa
ctggaggctcttcaagtgtcttacgagcgtttgctgagcagcgtgcaaagcttttccgac
acactagatgaaccaatgcccgagcttccagtagataatgagacaaaggcagaagcggaa
gagtcactgaagatgattaatgaaggagaagataacagtttattggaggatatgtggggt
gacgaagaaacaagactcttctatgaagattttccagatttaagggtttttctaccagga
tcgtatttgaaagagaccgcaaaagacacattcaaggacactcccttaacagaagacgct
ctcgacgaagaaattattttggacgagctggaggagactgagaaagttgaagaaccagaa
ccagaggtagaagagccgcaggtaactaacacaagtaataaaataatgctcgatgctttt
ctgacacaattgccgaactgtgtgaatcgcggaatgatcgacaacgccgcgatcaatttc
ctgatgaatctcaacacgaagtacaataagaagaaactggtgaaagcactttttggcgtc
tccagaatccgtcaagatttgttacctttctattctcgtttagcggctatcctttatccg
gtgatgcccgagatcggtaacgatctgtgtcagatgctgaagcaagatttcaaatatcac
gtacgcaagaaagatcaaatcaacatcgagtcgaaaattaaagtcgtccgctatattggc
gaacttgtcaagttcaagctatattcaaaaatagaggcgctctattgcctcaaagtgctg
ctacaagattttactcatcatcacattgaaatgacctgcaacttgctagaaatctgcggc
cgatatctgttttgctcgccggactcgcatcagagaaccaaagtctatctagagcaaatg
atgcgcaaaaaagcggtcaccgcgctcgactcgcgctacgttaccattattgaaaacgct
tattacttcgtgaatccacccgaatcgactatcggcgttgcgaaaaaagatagaccgccg
atgcacgaatttatcaggaaactgttgtatcaggacctttctaagacgaatactgacaaa
gtgctcaagttgatgcgcaaactcgactgggaagatgaaagcgtgtcatcgtatgccata
aaatgcctcactgctgcctacaacgtaaagtatcccaatattcgctgcatgggaagctta
ctagctggcttagtggcccattacgagaccatagggcctcaagtggttgatggcgtactc
gaagatattcgactatgcatggagatcaatttgcccaagtttaaccaacgacgcattgct
atggttaaatatttgggcgagctatataattaccgaatggtcgagagcggtgacatattc
cgaacgttatatcttttaatcactttcggagtcaccatggaccattccataccgagcacg
ctcgatccatctgatcatctatttcgtatacgcttggtgtgcactctgttggaaacatgt
ggtcaatatttcagtggtggttccagtaaaaagaagctcgattacttcttagtgttcttc
cagagttacttctggttcaagtacacggattcgttctggacaactgagaatccatttcct
ttcgatatagactacatgtaccgcgacacattgacaatgctgcgtcctaagatgcaactg
tttcagagctacaaagaggcgcaatgcgccatagaagaattgcggaatgttttgtatccc
ggcttgggttatcccgttgacgacactgaaggcgagaacgacatgagtgttattatggaa
ggtgacgaagaagcggcagtaactggaaacggtagcggagatgcgaagggcatagccgat
ctgcattttgaggaaccggaagattgttcggaggcacagtcggaggaagaatggacagct
gacgcggagcgagatgatgccatgggtactcaagaaaatactcaaggtgatcgatcacag
agtctgtccgcggaaggtggcactgaagtaatcattgatgtaaacgaagaactaaacgca
gccttaccgtccaagccgcgacgtttgagctgcccggaagacgacgattttctttcagca
ttggacaaaatggtgtctgataatatacaggaccgtatgcgggattcggtgaaaccgcaa
caggtcgacatctccgttccattgcacgtgaaaagtacaaagaagacgtacgaacagctg
caagagcgaccgagcgacaacagcacggtggatttcgtattgatgctgagaaaaggtaac
aagcaacaatataagaatctggcagtaccggtgtcgtccgagctggccatgaatcttaga
aatcgcgaacaggaacagaaagaagaaaaggaacgcgtcaagagattgacattgaatatt
accgagagacaagaggaggaagattatcaagaaaccatgaaccaaagtacgcgaccagtc
actgtaaatctgaacagagaacggcgacaaaaatataatcatcctaaaggcgcgccagat
gctgatctcatcttcggtccgaagaaaattcgataa
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