Phaeobacter gallaeciensis DSM 26640: Gal_00616
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Entry
Gal_00616 CDS
T02968
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd03030
DNA replication
pgd03430
Mismatch repair
pgd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gal_00616
03430 Mismatch repair
Gal_00616
03440 Homologous recombination
Gal_00616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgd03032
]
Gal_00616
03400 DNA repair and recombination proteins [BR:
pgd03400
]
Gal_00616
Enzymes [BR:
pgd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gal_00616
DNA replication proteins [BR:
pgd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gal_00616
DNA repair and recombination proteins [BR:
pgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gal_00616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AHD08401
LinkDB
All DBs
Position
614712..618224
Genome browser
AA seq
1170 aa
AA seq
DB search
MTNAPRFIHLRTHTEYSLLEGALRLKKLPDLCKKHEMPAIAVTDTNNLFAALEFSVGASG
AGVQPIMGCQVDLRFTEPAPGERPKPPAPLVLLAQSETGYEHLMKLNSCLYMREGSELAH
VTLEELAAHSEDVICLSGGPDGPVGRLLQMGQRPAAEALMQRLKEMFPDRLYVELQRHPG
EHGQPEAEQATERGHVEMAYAMDLPLVATNDVYFPNTEMYEAHDAMICIAEGAYVDQAEP
RRRLTAQHYFKSQEEMVALFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAELR
RIANEGLQQRLAVIPHAVSVEEYQERLDFELGIIEGMGFPGYFLIVADFIQWAKDHDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIKYV
QEKYGRDKVGQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKLIPVEGVKPMSIVDSLK
EEPRLREEAENEEVVDRLLKYGMQVEGLLRSAGTHAAGVVIGDRSLDALVPLYRDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFQSGRDLHVAADGTQLYDPPEGAE
NQINAIPLDDKVTYDLYSRAKTVAVFQVESTGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGLREITSVHPLIDHILEETQGIIVYQEQVMQIAQVMANYTLGGADLLRR
AMGKKIKEAMDAERPKFEKGAAENGVPAKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVKKGLRLPYVPPCVNRSEATFNVVKGE
LVYALGALKNVGVEAMRLVTAARRESGEDKPFATLFDFARRVDLKKVGKRPLEMLARAGG
FDQLDPNRRRVFDSLGALVDYSSAVHDQRNSSQVSLFGEAGEDLPEPRLPGTPDWLPAER
LSEEFKAIGFYLSGHPLDDYMPALKRKDVMTLDEVTAKAERGPFMAKMAGVVAGRQERKS
ARGNRFAFAQLSDTSGGYEVTLFSEVLEKSREFLETGAKVVITAEATMESDQLKLLVRSV
GPVDAAIADAGRSSLRVYVSDAKAVATVAQVLEDAKKAARNAARGEVYMYLQDPGLPGDV
EMDLGQPFPINPQIKGALKSLDGVMDVEEI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgctccccgattcattcatcttcgcacccataccgaatattcgctcttggaa
ggcgcgctgcggctgaagaagctgccggatctctgcaaaaaacacgagatgcccgcgatt
gcggtgaccgacaccaacaacctgtttgccgcactggaattttccgttggggccagcggg
gccggggtgcagccgatcatgggctgtcaggtggatctgcggtttactgaacctgccccc
ggagaacggccgaaaccgcccgctccgctggtgctgctggcgcagagcgagaccgggtat
gagcatctgatgaagctgaattcctgcctatatatgcgcgaaggcagtgagctggcgcat
gtaacgctggaggagcttgcggcgcattctgaagatgtgatctgcctcagcggcggaccg
gatgggccggtggggcggctgttgcagatggggcagcgtccggcggctgaggcattgatg
cagcggctgaaagagatgttcccggatcgtctgtatgtggagttgcagcgtcatcctggt
gagcatggccaaccggaagcggagcaggcgaccgagcgtggccacgtggaaatggcctat
gcgatggatctgccgctggttgccaccaatgacgtctatttcccgaatacagaaatgtat
gaggcacacgacgcgatgatctgcatcgccgagggcgcctatgtcgatcaggccgaacca
cggcggcgtctgaccgcgcagcattacttcaagagccaggaagagatggtggcgctgttt
gccgacctgcccgaggcgattgagaacacggtggagatcgccaagcgctgtgccttcatg
gcgtaccgccgcgacccgatcctgccgaagttcgccgatgatgaggtcgccgagctgcgc
cgcatcgccaacgaaggcctgcagcagcggctggcggtgatcccccatgcggtgagcgtc
gaggaatatcaggaacggctcgatttcgagttgggcatcatcgaggggatgggcttcccg
ggctacttcctgatcgttgccgactttatccaatgggctaaggatcatgacattccggtg
ggaccggggcggggttccggtgcgggttccctcgtggcctatgcgctgaccatcaccgac
cttgacccgctgcgttactccctgctgttcgagcgtttcctcaacccggaacgggtgtcg
atgcccgacttcgacatcgacttctgcatggaccgccgcgaggaggtgatcaaatacgtg
caggagaagtatggccgtgacaaagttggccagatcatcacctttggcgcgctgttgtcc
aaggcggcggtgcgcgacatggggcgggttttgcagatgccttatggccaggtggaccgg
ctctcgaagctgatcccggttgagggcgtgaagccgatgtctatcgtggactccctaaag
gaagagccgcgcttgcgtgaggaagccgagaacgaagaggttgtcgaccggctgctgaaa
tacggcatgcaggttgaggggctgttgcgctctgcgggcacccacgcggcgggggtggtg
atcggtgatcggtcgctggatgcgctggtgccgctttatcgcgatccgcgctcggatatg
cccgcgacccagttcaacatgaaatgggtggagcaggcggggctggtgaagttcgacttc
ctcggcctcaagacgctgaccgtgatccagaacgcgatggatctgattttccagtcgggc
cgtgacctgcatgtggccgccgatggcacccagctttatgatccgccggagggggcagag
aaccagatcaacgccattccgctggacgacaaggtcacctatgacctctactcgcgggct
aagacggtggcggtgttccaggtggaatccaccggtatgatggatgcgctgaagcgtatg
aaacccacctgtatcgaggatatcgtggcgctggtggccctctatcgtcccggtccgatg
gaaaacatcccggtctattgcgaggtgaagaacggcctgcgcgagattacctctgtgcat
ccactgatcgaccatatccttgaggaaactcaaggtattatcgtttatcaggaacaggtg
atgcagatcgcccaggtgatggcgaattacacgctgggcggcgcggatctgttgcgtcgc
gccatgggtaagaagatcaaagaggcgatggacgccgagcgcccgaagtttgaaaaaggt
gcggcggaaaatggcgttccggccaagaaggcctcggaagtgttcgaccttctggagaaa
ttcgccaactacggcttcaacaaatcccacgcggcggcctatgcggtggtcagctaccag
accggctggctgaaggcgaaccacccggtggaattcatggcgggcgtcatgaactgcgat
atccatctgacggataagctggcgatctacttcgaagaggtcaaaaaaggcctgcgcctg
ccttatgtgccgccctgtgtgaaccgctccgaggcaacattcaatgtggtcaaaggcgag
ctggtttatgcgctgggcgcgctgaaaaacgttggcgtcgaggcaatgcggctggtgacg
gcggcgcggcgggagagcggtgaggacaaaccctttgccacgctgtttgattttgcccgc
cgggtggatttgaaaaaggtcggcaaacgccccttggaaatgctggcacgggccggtggg
tttgaccagctggaccccaaccgccgtcgggtgtttgatagcctcggcgcgctggtggac
tattcgtccgccgtacatgatcagcgcaattccagtcaggtgtcattgtttggtgaggcc
ggggaggatctgccggagccgcgtctgcccggcacgccggactggctacctgctgagcgg
ctctccgaggagttcaaggcgatcggcttctacctctcgggccatccgctggacgactat
atgcctgcattgaaacgcaaggatgtgatgacgctggacgaggtgacagccaaggcggag
cgcgggccgttcatggctaagatggctggtgttgtcgccggtcggcaggagcgcaaatca
gcacgcggcaaccgctttgcctttgcccagctgtcggacaccagtggcgggtatgaggtc
acgctgttttccgaagtgctggagaagtcacgcgaatttctggaaaccggcgccaaggtg
gtgatcactgccgaggccacaatggaaagcgatcagctgaaactgctggtgcggtccgtc
gggcccgtggatgcggcgatcgccgatgctgggcgcagttcgctgcgggtctatgtctcg
gacgcgaaggccgtagcgactgtggcgcaggtgcttgaggatgcgaagaaagccgcccgc
aacgccgcgcgcggggaggtctatatgtacctgcaggatcccggcctgcctggggatgtt
gagatggatctgggccagcccttccccatcaacccccagatcaaaggcgcgctgaaatca
ctggacggcgtgatggatgtggaggagatttga
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