Phaeobacter gallaeciensis DSM 26640: Gal_00817
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Entry
Gal_00817 CDS
T02968
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Gal_00817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgd03400
]
Gal_00817
DNA repair and recombination proteins [BR:
pgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gal_00817
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Gal_00817
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
Kinesin
UB2H
DUF87
AAA
eIF3_p135
Microtub_bd
AAA_25
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AHD08599
LinkDB
All DBs
Position
complement(822393..824594)
Genome browser
AA seq
733 aa
AA seq
DB search
MPYAHSDKSMPMMADRAPQHRPKLEGGREFVMHTEFDPAGDQPTAIKELSAGVLDGERNQ
VLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENSVEYFVSFYDY
YQPEAYVARSDTYIEKESQINEQIDRMRHSATRSLLERDDVIIIASVSCIYGIGSVETYS
AMTQDLKVGEDYDQRQVMADLVAQQYKRNDQAFQRGSFRVRGDSLEIFPAHLEDRAWRLS
FFGEELEGITEFDPLTGEKTGSFDQIRVYANSHYVTPKPTLKQAVISIKEELKMRLDQLV
GEGKLLEAQRLEQRTNFDIEMLEATGHCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIV
FADESHVSVPQIGGMYKGDHRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSAT
PAAWEIEQSGGVFAEQVIRPTGLLDPEVEIRPVDMQVDDLLDEVRRVTENGFRTLVTTLT
KRMAEDLTEYMHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPEC
GLVAILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRITGSMERALGETNRRREKQ
IAYNEEHGITPATVKKNVEDVLAGLYEGDVDMNRVTATIDQPMHGANLEAHLAGLREQMR
KAAENLEFEEAARLRDEVKRLEAVDLAVSDDPLARQSAIEAASDAAVKSRGRSTAGKAGT
RAYRGKSQKKFSS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgcccattccgacaaatccatgccgatgatggctgaccgcgcgccgcagcac
cgccccaagctggaaggtgggcgggaatttgtgatgcatacggaattcgacccggccggc
gaccagcccaccgcaatcaaggagctatcagcaggcgtgctggacggcgaacgcaatcag
gtcctgctgggggcgacgggaacgggcaagaccttcaccatggccaaggtgatcgaggag
acccagcgcccggcaatcatcctcgcccccaacaagacgctggcggcgcaattatacggc
gaattcaaaggcttcttcccggaaaactccgtcgaatacttcgtctccttctacgactat
taccagccagaggcctatgtcgcgcgctccgacacctatatcgagaaggaaagccagatc
aacgaacagatcgaccggatgcgccactctgccacccggtcgctgttggaacgggatgat
gtgatcatcatcgcgtctgtgagctgcatctacggtatcggctcggtcgagacctattcg
gcgatgacgcaggacctgaaagtgggtgaagactatgaccagcggcaggtcatggccgat
ctggtcgcgcagcagtacaaacgcaacgatcaggcgtttcagcgcggcagcttccgggtg
cgcggcgattcgctggagattttccccgcccaccttgaggatcgcgcctggcggctgtcc
ttctttggtgaggagctggaggggattaccgaattcgacccgctcaccggcgagaaaacc
ggcagtttcgatcagatccgcgtctacgcgaattcccactatgtgaccccgaagccgacg
ctgaaacaggcggtcatttcgatcaaggaagagctgaagatgcggctggatcagctggtt
ggcgagggcaagctgctggaagcacagcggctggaacagcgcaccaatttcgatatcgag
atgctggaggccaccggtcattgtaacgggatcgagaactactcgcgctatctgaccggt
cgcgctccgggggagccgccccctaccctgtttgaattcatcccggacaatgcaattgtt
tttgcagatgaatcccatgtttccgtgccgcagatcggcggcatgtacaaaggtgaccac
cggcgcaagttcacgctggccgaacatggtttccgcctgccctcctgcatggacaaccgc
cccctcaagtttgaggaatgggacgccatgcgcccgcaatcggtctttgtctctgccaca
ccggcggcctgggagattgagcaatcgggcggcgtttttgccgaacaggtgatccgcccg
accggcctgttggacccggaggtggaaatccgcccggtggatatgcaggtcgatgacctg
ttggatgaagtgcgccgtgtcaccgaaaacgggttccgcacgctggtgacaaccctcacc
aaacgcatggccgaggatctgaccgaatatatgcacgaacaggggatcaaggtccgctat
atgcacagcgatatcgacacgctggaacggatcgaaatcctgcgggatctgcgacttggc
gcctttgacgtgctgatcggcatcaacctgttgcgcgagggtctggatatccccgaatgt
ggtctggtcgccattctggatgccgacaaggaggggttcctgcgctcggaaacctcgctg
atccagaccatcggacgtgccgctcgaaatgccgatggccgggttatcatgtatgcagac
cgcatcactggttcgatggaacgcgcactgggcgagaccaaccgccgtcgcgagaaacag
atcgcctataacgaggaacacggcatcacccctgcgaccgtcaaaaagaacgtcgaggat
gttctggccggtctctatgagggcgatgtggatatgaaccgcgtcaccgcaaccatcgac
caaccgatgcatggtgccaatctggaggcccatttggcggggctgcgcgagcagatgcgc
aaggccgccgagaacctggagttcgaagaagccgcgcgtctacgcgacgaggtcaagcgg
ctggaagcggtggatctcgcagtttccgacgacccgctagcgcgtcagtccgcgattgag
gccgcatcagatgccgccgtcaaatcacgggggcgttccaccgcaggcaaagccggaaca
cgggcctatcggggcaagtcgcagaagaagttctcgtcgtag
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