Phaeobacter gallaeciensis DSM 26640: Gal_01405
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Entry
Gal_01405 CDS
T02968
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd02020
Two-component system
pgd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Gal_01405
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Gal_01405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgd03021
]
Gal_01405
Transcription machinery [BR:
pgd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Gal_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_23
MarR_2
LacI
HTH_Crp_2
HTH_38
HTH_20
DUF6549
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AHD09167
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Position
1411808..1413052
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AA seq
414 aa
AA seq
DB search
MPLKTQLRAKHGQVFRLGQVVNLLQMSSAELTEHLAAQAQENPVLVLRQRRAASMSATDV
LEMTAVEQANSLYDHVFQELAGLIGQGGLMEKVITALVAELEPSGWLGRPVDAIAESLDL
SVMLVETALQVVQKRIDPPGLFARNLQECLRLQLEERETMTADMDVVLAHLSELESGGTA
ALVRATGLSGDAVQDCLVLLRQLDPKPGTAFVSDPTLTREPDVRVSLSDDRLEIEYLAAW
QGDVEIIDLPRSGRASEATEALAQARSLQHALKARASAQKQVVGQIVERQGAYFRFGDQA
LVPMTLSEIAQETGFHLSTVSRVLNGLLIEGPNGIVLARTLFSGTASVRGTQSKPQVQAR
IRALLAEEDSKKPLSDRRLTAILQSEGIAISRRVVSNYRQDIGIHPAAKRRQRA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgcctttaaagacgcagctgcgcgcgaaacacggccaggtttttcgacttggtcaagtt
gtaaacctgctgcagatgtcatctgccgaactgactgagcatctggcagcgcaggcgcag
gaaaatccggtgttggttttgcgccaacgccgtgcggcttcgatgagtgccaccgatgtt
ctggagatgactgcggtagagcaagcaaacagcctttacgatcatgtatttcaggagctg
gcagggttgatcggtcagggcgggctgatggaaaaagtcatcaccgcattggtggcggaa
ctggaaccgtcgggctggctgggtcgtccggttgacgcgattgctgaaagcctagatctg
agtgttatgctggtagagaccgccttgcaggttgtccaaaaacgtattgatccgccgggg
ctgtttgcacggaatttacaggaatgcctgcggttacagctggaagagcgggagaccatg
actgcggatatggacgtggttttggcccatctttctgagctggaaagcggtggtactgca
gctttggtccgggcgacagggttgtcaggggatgccgtgcaggattgtctggtacttctg
cgacagcttgacccgaaaccgggcactgcttttgtctctgatccgacgcttactcgggaa
ccggatgttcgggtttcgctgtcagatgatcggctggaaatcgaatatctcgcggcttgg
caaggcgacgtcgagattattgatctgccccgcagcggtcgcgcaagtgaagctacagaa
gcattggctcaagcgcgatcactgcaacatgctttgaaagcgcgcgcctcggcgcaaaaa
caagttgttggacaaattgtggaacgtcagggggcgtatttccggtttggcgatcaggct
ttggttcccatgaccttgtctgaaatagcccaggaaaccgggtttcatctgagcactgtc
agccgtgttttgaatgggcttctgatcgaagggccgaacggtattgttttggcacgcact
ttgttttccggcacggcatctgttcgcggaacccaatccaagccacaggtgcaggcgcgt
attcgggcgctgctggctgaagaagacagcaagaaaccgctgtcggaccggcgactgaca
gcgatccttcagtctgaagggatcgcgatttcacgccgggttgtctcaaactaccgtcag
gatatcggtatccatccggcagcaaagcgacgccagcgagcctga
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