Phaeobacter gallaeciensis DSM 26640: Gal_01412
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Entry
Gal_01412 CDS
T02968
Name
(GenBank) Chaperonin GroEL (HSP60 family)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gal_01412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgd03019
]
Gal_01412
03110 Chaperones and folding catalysts [BR:
pgd03110
]
Gal_01412
03029 Mitochondrial biogenesis [BR:
pgd03029
]
Gal_01412
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgd04147
]
Gal_01412
Enzymes [BR:
pgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Gal_01412
Messenger RNA biogenesis [BR:
pgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Gal_01412
Chaperones and folding catalysts [BR:
pgd03110
]
Heat shock proteins
HSP60 / Chaperonin
Gal_01412
Mitochondrial biogenesis [BR:
pgd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Gal_01412
Exosome [BR:
pgd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Gal_01412
Exosomal proteins of other body fluids (saliva and urine)
Gal_01412
Exosomal proteins of breast cancer cells
Gal_01412
Exosomal proteins of colorectal cancer cells
Gal_01412
Exosomal proteins of bladder cancer cells
Gal_01412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHD09174
LinkDB
All DBs
Position
1419924..1421555
Genome browser
AA seq
543 aa
AA seq
DB search
MAKLMVHGQTARNCLARGVARLAAAVEPTLGPKGLNAMVDRPVGTPLVTRDGVSIASEIE
LRDRFENMGAQVVREVSMQTNDVAGDGTTTAIVLANSLIQRGVDLTEKGVKPVDLCKGID
LAVARIVDAIDASSLDCDDHPEYLEAVARVSSTDPKLGELVAEAYRRVGRDGVISADFGV
TIETTMDVVEGMSFERGYISHHMVTDREQMEAVLRNPLILLTDQKILKPETLNSAISIAD
SEGRPLLIVAEEIAPEVVIKLLETGGAGKYLIVHPPEYGHWRTAMMDDLAILTGGEVLAR
DLGKKIENVTLAQLGGAEMVRSHSSGTSVLRGEGDPDAITARRNQVQRQHDVAPPNIEKD
KLRERLSKLTGGSAIIYAGGFTPVEQKRTIQLIEDALCAVQAAAEDGVIAGGGTALAQIS
DCLDTLDALGDVAKGIQLVRSILTEPVRRIARNAGADIAAVAQAVAEGPAGHGYNAATGA
FGDMYEAGIIDPARVPASALVNAASVATLILTTETLVGDLDEGEADPTEGPALGGGAELL
GRA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctaaactcatggtacacggccagactgctcgcaactgcctggcgcgcggcgttgcg
cggctggcggcagcggtagaaccgacgcttgggcccaaggggctgaacgcgatggtggac
cgcccagtgggcactccgctagtgacccgtgacggggtgagtattgcgtcggagatcgaa
ctcagggaccggttcgaaaacatgggcgcacaagtcgtgcgcgaggtttcgatgcaaacc
aatgacgtggcaggcgacgggaccacgaccgctattgtgcttgccaactcattgattcag
cgcggtgttgatctgaccgaaaagggggtgaaaccagtcgatctttgcaaggggattgat
ctggcggtagcgcggattgttgatgcgattgatgcgtcttcgctcgattgcgacgaccac
ccagaatatcttgaggccgttgcgcgcgtgtcgtcgaccgatcccaagctgggtgaactg
gtcgcagaggcctatcgtagagtgggccgagatggtgtgatttcggctgattttggcgtc
accatcgaaaccacgatggatgtggttgaaggtatgtcttttgagcgtggatacatctcc
catcacatggtcacggaccgcgagcagatggaagctgtgctgcgtaacccgctgatcctg
ttgacagatcagaagatcctgaaaccggagacgctgaattccgccatttctattgctgac
agcgagggtcggccgcttctgatcgtcgcggaggagatcgcgccagaggtcgtgatcaag
ctgctggagaccggcggtgcggggaaatatctgatcgtacatccgccagaatatggtcat
tggcgcacggccatgatggatgatcttgccattctgacgggcggtgaagttctggcgcgc
gatcttggtaagaagattgagaatgtcacactggctcagctgggaggggcggaaatggtt
cgttctcactcttccggaacctcggttttgcgtggtgagggtgatccagacgcgatcaca
gcgcgtcgcaatcaggttcagcgccagcatgacgtggcaccgccgaacatcgaaaaagat
aaactgcgcgagcggttgtcgaagctaacaggcggcagcgcgatcatctacgcaggcggt
ttcaccccggtggagcagaagcgcacgatccagctgatcgaagatgcgctctgtgcggtc
caggctgctgctgaagatggcgtgattgcaggtggcggaacggcgttggcgcaaatctct
gattgtctcgacacgctggatgcactcggcgacgtggcgaaagggattcagctggtgcgg
tcgatcctgaccgaaccggtccgtcgcattgcccgcaatgccggggccgacatagctgcc
gtggcgcaggcggtggctgaggggcccgcgggccacggctacaacgctgccaccggtgcc
ttcggcgatatgtatgaggctggcattatcgatccagcccgtgtgcctgccagcgcgctg
gtcaacgccgcctccgtcgcgacgttgatcctgaccaccgaaactcttgtcggagacctc
gacgaaggggaagccgacccgaccgaaggtcccgctcttggtggcggagccgaacttttg
ggccgcgcgtga
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integrated database retrieval system