KEGG   Phaeobacter gallaeciensis DSM 26640: Gal_01412
Entry
Gal_01412         CDS       T02968                                 
Name
(GenBank) Chaperonin GroEL (HSP60 family)
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
pgd  Phaeobacter gallaeciensis DSM 26640
Pathway
pgd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pgd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Gal_01412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgd03019]
    Gal_01412
   03110 Chaperones and folding catalysts [BR:pgd03110]
    Gal_01412
   03029 Mitochondrial biogenesis [BR:pgd03029]
    Gal_01412
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgd04147]
    Gal_01412
Enzymes [BR:pgd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Gal_01412
Messenger RNA biogenesis [BR:pgd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Gal_01412
Chaperones and folding catalysts [BR:pgd03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Gal_01412
Mitochondrial biogenesis [BR:pgd03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Gal_01412
Exosome [BR:pgd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Gal_01412
  Exosomal proteins of other body fluids (saliva and urine)
   Gal_01412
  Exosomal proteins of breast cancer cells
   Gal_01412
  Exosomal proteins of colorectal cancer cells
   Gal_01412
  Exosomal proteins of bladder cancer cells
   Gal_01412
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AHD09174
LinkDB
Position
1419924..1421555
AA seq 543 aa
MAKLMVHGQTARNCLARGVARLAAAVEPTLGPKGLNAMVDRPVGTPLVTRDGVSIASEIE
LRDRFENMGAQVVREVSMQTNDVAGDGTTTAIVLANSLIQRGVDLTEKGVKPVDLCKGID
LAVARIVDAIDASSLDCDDHPEYLEAVARVSSTDPKLGELVAEAYRRVGRDGVISADFGV
TIETTMDVVEGMSFERGYISHHMVTDREQMEAVLRNPLILLTDQKILKPETLNSAISIAD
SEGRPLLIVAEEIAPEVVIKLLETGGAGKYLIVHPPEYGHWRTAMMDDLAILTGGEVLAR
DLGKKIENVTLAQLGGAEMVRSHSSGTSVLRGEGDPDAITARRNQVQRQHDVAPPNIEKD
KLRERLSKLTGGSAIIYAGGFTPVEQKRTIQLIEDALCAVQAAAEDGVIAGGGTALAQIS
DCLDTLDALGDVAKGIQLVRSILTEPVRRIARNAGADIAAVAQAVAEGPAGHGYNAATGA
FGDMYEAGIIDPARVPASALVNAASVATLILTTETLVGDLDEGEADPTEGPALGGGAELL
GRA
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggctaaactcatggtacacggccagactgctcgcaactgcctggcgcgcggcgttgcg
cggctggcggcagcggtagaaccgacgcttgggcccaaggggctgaacgcgatggtggac
cgcccagtgggcactccgctagtgacccgtgacggggtgagtattgcgtcggagatcgaa
ctcagggaccggttcgaaaacatgggcgcacaagtcgtgcgcgaggtttcgatgcaaacc
aatgacgtggcaggcgacgggaccacgaccgctattgtgcttgccaactcattgattcag
cgcggtgttgatctgaccgaaaagggggtgaaaccagtcgatctttgcaaggggattgat
ctggcggtagcgcggattgttgatgcgattgatgcgtcttcgctcgattgcgacgaccac
ccagaatatcttgaggccgttgcgcgcgtgtcgtcgaccgatcccaagctgggtgaactg
gtcgcagaggcctatcgtagagtgggccgagatggtgtgatttcggctgattttggcgtc
accatcgaaaccacgatggatgtggttgaaggtatgtcttttgagcgtggatacatctcc
catcacatggtcacggaccgcgagcagatggaagctgtgctgcgtaacccgctgatcctg
ttgacagatcagaagatcctgaaaccggagacgctgaattccgccatttctattgctgac
agcgagggtcggccgcttctgatcgtcgcggaggagatcgcgccagaggtcgtgatcaag
ctgctggagaccggcggtgcggggaaatatctgatcgtacatccgccagaatatggtcat
tggcgcacggccatgatggatgatcttgccattctgacgggcggtgaagttctggcgcgc
gatcttggtaagaagattgagaatgtcacactggctcagctgggaggggcggaaatggtt
cgttctcactcttccggaacctcggttttgcgtggtgagggtgatccagacgcgatcaca
gcgcgtcgcaatcaggttcagcgccagcatgacgtggcaccgccgaacatcgaaaaagat
aaactgcgcgagcggttgtcgaagctaacaggcggcagcgcgatcatctacgcaggcggt
ttcaccccggtggagcagaagcgcacgatccagctgatcgaagatgcgctctgtgcggtc
caggctgctgctgaagatggcgtgattgcaggtggcggaacggcgttggcgcaaatctct
gattgtctcgacacgctggatgcactcggcgacgtggcgaaagggattcagctggtgcgg
tcgatcctgaccgaaccggtccgtcgcattgcccgcaatgccggggccgacatagctgcc
gtggcgcaggcggtggctgaggggcccgcgggccacggctacaacgctgccaccggtgcc
ttcggcgatatgtatgaggctggcattatcgatccagcccgtgtgcctgccagcgcgctg
gtcaacgccgcctccgtcgcgacgttgatcctgaccaccgaaactcttgtcggagacctc
gacgaaggggaagccgacccgaccgaaggtcccgctcttggtggcggagccgaacttttg
ggccgcgcgtga

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