Phaeobacter gallaeciensis DSM 26640: Gal_01888
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Entry
Gal_01888 CDS
T02968
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgd03032
]
Gal_01888
03400 DNA repair and recombination proteins [BR:
pgd03400
]
Gal_01888
Enzymes [BR:
pgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Gal_01888
DNA replication proteins [BR:
pgd03032
]
Prokaryotic type
DNA Topoisomerases
Gal_01888
DNA repair and recombination proteins [BR:
pgd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Gal_01888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HIN
Motif
Other DBs
NCBI-ProteinID:
AHD09640
LinkDB
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Position
1909574..1912294
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AA seq
906 aa
AA seq
DB search
MDESKPERPQYDGPTVSIESEMRTSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMHEV
GNSHDKPYRKSARPVGDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGD
NPAAMRYTEVRMDKPAASILADIEKDTVDFQDNYDGKDREPTVLPARFPNMLVNGAGGIA
VGMATNIPPHNLGEVIDATLALIEDPDLTSEQLIDFVPGPDFPTGGVMLGRSGARKAYLE
GRGSVVIRAKTRVEEIRKDRYAIVVEEIPYQVNKAAMIEKIAEQVREKKIEGVSHVQDES
DRNGVRVVVELKRDATAEVVLNQLYRFSPMQTHFGCNMLALNGGRPEQLTLRRFLTSFLD
FREDVIARRTAYDLRKARERSHILCGLAVAVSNVDEVVATIRASADAAEARHKLMTRRWP
ATDIAPYIRLIDDPTHTMNDDGTYNLSEIQARAILELRLQRLTQIGVKEVTDELEELAGK
IKEYLEILSSRERILGIISDELREVRDNFAVPRRTQIVDWSGDMEDEDLIEREDMVVTIT
SGGYIKRTPLADFRAQKRGGKGLSGMQTKEEDVVTNLFVANTHTQLLFFTTDGMVYKLKT
WRLPQGGRTSKGKAIVNILPIPPGVSIAAIMPVDVPDDEWENLQVVFATSGGDVRRNRLS
DFTNVRRNGKIAMKLPEDGSVRLVNARICSEEDDVMLVTNSGRAIRFRSTDVRVFNSRES
TGVRGIRLVSDGDEVVSMSVIRHFSAEPWERNAFIKRFRSELGGDVTEEENGEETEGSLS
EERYQEMLAANDLLVTINRTGVGNLTSAHDYRVSGRGGQGVGAMKGGAIVATFPVELEDQ
IMLATSKGQSIRCPVNGISFRSRSAGGVRVFNTAKGEEVVSVAWIAERDDEEVPASEDTS
ETAEAT
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaagcaaacctgaacggccccaatatgacggcccaacggtgtccatcgaatcc
gagatgcgcacatcgtatctcgattatgcgatgtcggttattgtcagccgcgccattcct
gacctgcgtgacggtctgaaaccggttcaccgccggattctctacgccatgcatgaggtc
ggaaactcgcatgacaaaccctaccgcaaatcggcgcgtccggttggcgatgtcatgggt
aaataccaccctcatggcgactccgcgatttatgacgccttggtgcggatggcgcaggat
ttctccatgtcgctgccgctgttggatgggcaaggcaactttggctccatggatggcgat
aacccagccgccatgcgctataccgaggtgcggatggacaagcccgccgcctctatcctc
gccgacattgaaaaagacaccgttgattttcaggacaactatgatggcaaggaccgcgaa
cccacggttctgcccgcccgtttcccgaatatgctcgtcaatggcgcgggcggtattgcg
gttggcatggccaccaatattccgccccataacttgggcgaggtgattgatgccacgctc
gcgctgattgaggacccggatctgaccagcgaacagctgatcgactttgtgcccggcccg
gactttccgaccggcggcgtgatgctgggtcgttccggggcgcgcaaggcctatctggaa
ggacgcggcagcgtcgttattcgcgccaagacccgcgttgaggagatccgcaaagaccgc
tacgccatcgtggtcgaagaaatcccctatcaggtcaacaaggccgcgatgatcgaaaag
atcgccgaacaggtgcgcgagaaaaagattgagggtgtcagccacgttcaggatgaatcc
gatcgcaacggcgtgcgggttgttgtggagctgaaacgcgatgccacggctgaggtggta
ctgaaccagctctatcgtttctcgcccatgcagacccattttggctgcaacatgctggcc
ctgaacggcggtcgccccgagcagctgacgctgcgccggttcctgacctccttccttgat
ttccgcgaagacgtgattgcgcggcgcaccgcctatgacctgcgtaaggcgcgggaacgc
agccatattctgtgcggcttggccgtcgcggtttctaatgtggacgaggtggtcgcgacc
atccgtgcctctgcggatgcagccgaagccagacataagctgatgacccggcgctggccc
gcaaccgacatcgcaccttatatccgtctgatcgacgatccgacccacaccatgaatgac
gacggcacctacaatctctccgagattcaggcccgcgccattctggaactgcgcctgcaa
cgtctcacccagattggtgtcaaggaagtcaccgacgagctggaagaactggcaggtaag
atcaaggaataccttgagatcctgtcctcgcgcgagcggatccttggcatcatatcggac
gagttgcgcgaagtgcgtgataatttcgccgttccccgtcgtacacagattgtcgactgg
tccggtgacatggaagacgaagacctgatcgagcgcgaagacatggtcgtgacgatcacc
agcggcggctacatcaagcggaccccgctggccgacttccgggcgcagaagcgtggcggt
aaggggctgtcgggcatgcagacgaaggaagaggatgttgtcaccaacctctttgtggcc
aatacccatacccagctgttgttcttcaccactgacgggatggtctacaagctgaagacc
tggcgcctgccgcaaggtggccgcacctcgaagggtaaggcgattgtcaacattctgccg
atcccgccgggcgtctccatcgcggcgatcatgccggtcgatgtgccggatgacgaatgg
gaaaacctgcaggtggtctttgccacctcgggcggggatgtccgtcgcaaccgcctgtcg
gatttcaccaatgtgcgccgcaacggcaagatcgccatgaaactgccggaagatggctcc
gtcaggctggtcaatgcccgcatctgctccgaagaggacgatgtgatgctggtgaccaat
tccgggcgggcgatccggttccgttcgaccgacgtccgcgtcttcaactcccgtgaatcg
accggggtgcgtgggatccggctggtgagcgacggggatgaagtcgtctcaatgtcggtg
atccgccacttcagcgcagagccctgggaacgcaatgcctttatcaagcgcttccgctct
gagcttggtggggatgttaccgaagaagaaaatggtgaagaaaccgaagggtcgctttcc
gaggagcggtatcaggaaatgctggcggccaatgatcttctggtgaccatcaaccgcact
ggtgtgggcaatttgacttcggcccatgactaccgtgtcagcgggcgtggtggtcagggt
gtgggcgcgatgaaaggcggtgccatcgtcgcgaccttcccggtcgagcttgaggatcag
atcatgctggcgacctccaaaggccagtcgatccgttgccctgtcaatggcatctcgttc
cgttcccgcagcgccggtggcgttcgcgtcttcaacaccgccaagggcgaagaggtcgtc
tcggtcgcgtggattgcggagcgcgacgacgaagaggtccccgcgtctgaggataccagc
gaaactgccgaggcaacctga
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