Phaeobacter gallaeciensis DSM 26640: Gal_02512
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Entry
Gal_02512 CDS
T02968
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gal_02512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgd03019
]
Gal_02512
03009 Ribosome biogenesis [BR:
pgd03009
]
Gal_02512
Enzymes [BR:
pgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gal_02512
Messenger RNA biogenesis [BR:
pgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Gal_02512
Ribosome biogenesis [BR:
pgd03009
]
Prokaryotic type
rRNA helicases
Gal_02512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
TAL_effector
Motif
Other DBs
NCBI-ProteinID:
AHD10257
LinkDB
All DBs
Position
complement(2524450..2526729)
Genome browser
AA seq
759 aa
AA seq
DB search
MNPVQKGPKPISARTWMRTSAFLRSRGHSRYRRGQGGAPRSKRNEILKTALEQALQARGY
EHLTPVQEAVTAAELDQSDLLVSAQTGSGKTVGFGLAMAPTLLGDAEKLDRADLPLALVI
APTRELALQVKRELGWLYAEAGAHVVSTVGGMDMRDERRALERGAHIVVATPGRLRDHIM
RGSLNLSQVRAVVLDEADEMLDLGFREDLEFILGESPEERRTLMFSATVPAGIARLAETY
LKDHQRIKTVAEASQHADIEYQMLAVAQRDVENAVINVLRFHESPNAIVFCNTRAVVNRM
TTRLSNRGFSVVALSGELSQAERSNALQSLRDGRARVCVATDVAARGIDLPKLDLVIHAD
LPSSHETLLHRSGRTGRAGRQGVSALIVPPKAKGKALRLLRSAKITAETSPAPSADDVRS
RDFERLLGDKAWSEPVSENETAPVAELVERFSPEQLAAAYLRLFHDRHSAPEELSDPQHD
KRERQERAPFGPSVWFAVSGGRKAGAEPRRLLPALCNAGGLTKDDIGAIRVQFDQSYVEV
REGSAESFWGAVKHDGLEEGANVTRLDKAPDLPKSPRPQGREGGGFRDDKRGHRGQDRGD
RGDRGDRGDRGGERGERKPYGDKPRFDKPRGDKPAYGDKPRGEKPYGDKPRASKPYGDKP
RSDKPAYGDKPRFDKPKRTGEGGKATVTARGSSDRGAAPSAPAKPAVPGKPKGDWSNPGK
SGRKGPPPPKGKPNSKKNKARAAVAGKAGGNARPQRKGS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgtacaaaaggggccaaagccgatatcagcgcgcacttggatgaggacatcc
gcgttcctgcgcagtcggggacattcccgatatcggcgtggccaaggtggcgcgccccgc
agcaagcgaaatgaaatcttgaaaacagcactcgaacaagcgcttcaggcgcgcggctac
gagcatttgacacccgtgcaagaggccgtcactgcagccgagctggaccagtccgacctt
ctggtgtcggcccagaccggttccggcaaaaccgtaggctttggcctggcgatggccccc
acattgttgggcgacgccgagaaactggaccgtgccgatctgccgctggcactggtcatt
gcgccgacccgtgaactggcgttgcaggtcaaacgcgaacttggctggctttatgccgaa
gccggggcacatgtggtctctaccgttggtggtatggacatgcgcgatgagcggcgtgca
ctggaacgtggcgcccatatcgttgtggcgacaccgggccggctgcgcgaccacatcatg
cgcggctccctcaacctgtcgcaggtccgcgccgtggtgttggacgaagccgatgagatg
ctcgatctgggcttccgcgaagatcttgaattcattctgggcgagtccccggaagagcgc
cgcacattgatgttctcggccaccgtgcctgcgggcattgcgcggctggcggagacctat
ttgaaggatcaccagcggatcaaaaccgtggcagaagcctcgcagcatgcggatattgaa
tatcagatgctggccgtggcgcagcgggatgtcgagaacgcggtcattaacgttcttcgc
ttccacgagtcgcccaatgcgattgtgttctgcaacacccgtgcggtggtgaaccggatg
accacgcggctgagcaatcgcgggttttccgtggttgccctgtccggtgagctgtcccag
gcggagcggtccaacgcgctgcagtccctgcgggacgggcgggcccgtgtctgcgtggca
acggatgtggcggcgcgcgggatcgacctgccgaagctggatctggtcattcacgcggat
ctgccatccagccatgagacgctgttgcaccggtcgggccgtactggccgtgccgggcgt
cagggcgtgtccgcgctgatcgtgccgccaaaggcaaagggcaaggccctgcgcctgctg
cgctcggccaagatcacggcagagaccagcccggcccccagtgccgatgatgtccgcagc
cgcgactttgagcgcctactaggcgacaaggcctggagcgaaccggtcagcgaaaacgag
accgcccctgtggcagagctggttgagcggttctcgcccgagcagctggccgccgcctat
ctgcgtctgttccacgatcgccacagcgcgcctgaggagctgagcgatccgcagcacgac
aaacgtgagcgccaagaacgcgcgccctttggtccgtccgtgtggttcgccgtcagcggt
ggccgcaaggccggtgccgagccgcgccgactgctgcctgcactgtgcaatgccggaggg
ctaaccaaggatgatatcggcgcgatccgggttcagtttgaccaaagctacgtggaagtg
cgcgagggcagcgccgaaagcttctggggcgcggtgaaacatgacggtctggaagagggg
gcaaatgtcacccgtctggataaagcgccggatctgcccaaatccccacgcccgcagggc
cgtgaaggcggtggtttccgcgatgacaaacgcggccatcgtggacaggatcgcggagat
cgcggagatcgcggagatcgtggagatcgcggtggcgaacggggggagcgtaagccctat
ggcgacaagccccgctttgacaaaccgcgcggcgacaagcctgcttacggtgacaagcca
cgtggtgaaaaaccatatggcgacaagccgcgggccagcaaaccctatggcgataaaccg
cgcagtgacaaaccggcctatggcgacaagccccgtttcgataagcccaagcgcacaggt
gagggcgggaaagccacggtgaccgcacgcggatcgtcggaccggggggcagcgccgtcg
gcgcctgccaaacctgcggttccgggtaagcccaagggcgattggtccaatccgggaaaa
tcgggtcgtaaaggaccgcctccgccgaaggggaagcccaacagcaagaaaaacaaggca
cgtgcagccgttgccgggaaagccggtggcaacgcgcggcctcagcgcaagggcagctga
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