Phaeobacter gallaeciensis DSM 26640: Gal_03121
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Entry
Gal_03121 CDS
T02968
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd00330
Arginine and proline metabolism
pgd00480
Glutathione metabolism
pgd01100
Metabolic pathways
pgd01110
Biosynthesis of secondary metabolites
pgd04148
Efferocytosis
Module
pgd_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Gal_03121
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Gal_03121
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Gal_03121
Enzymes [BR:
pgd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Gal_03121
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHD10849
LinkDB
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Position
complement(3168782..3169957)
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AA seq
391 aa
AA seq
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MNANVTGPLVREDAIAPVSRHLSYIAQNAFDRPTLVIDSQAVARQYAALAQGLGRARIHY
AVKANPEPQILRRLTRMGANFDAASRAEIEMCLAAGAKPKQITFGNTIKRPADIAFAHEI
GITHFAVDALEELEKLAAHAPGARVCIRLLVEATGADWPLSRKFGCTAGMALTLMDRARD
LDLCVSGLSFHVGSQTREPQMWADTLDQVAQVWRSAKGAGHQLTLLNIGGGFPASYGTEV
MAPNRYAQEVMALVNARFPDACEIMAEPGRGLVAEAGAIAAEVLLVSRKDAGDLHRWVYL
DIGKFSGLAETMDEAIRYRITTDHGDGQTGPCILAGPSCDSADVLYEKQLYQMPLELKAG
DRVVIHACGAYTSTYASVGFNGFPPLDVVVI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaaacgtaaccgggccactcgtccgtgaagatgctattgctcccgtttctcgc
cacctgtcttacattgcacagaacgcatttgaccgaccgacactggtgatcgacagtcaa
gctgtcgcccggcaatacgccgctctcgcgcagggtctgggccgcgcccgtattcactac
gcagtcaaagccaatccggagccgcagatcctgcgtcgtctgaccaggatgggggcgaat
tttgatgccgccagccgtgctgagatcgagatgtgtttggccgctggcgcaaaaccgaaa
cagatcacctttggcaacaccatcaagcgtccggcggacatcgctttcgcgcatgagatc
ggtatcacgcatttcgctgttgatgctttggaggaactggaaaaattggccgctcacgcg
ccgggcgcgcgggtttgtatccgtctgctggttgaggcgaccggcgccgattggccgctg
agccgtaagttcggctgtaccgcaggaatggccctgaccctgatggaccgggcccgcgac
cttgatctctgcgtgtctggtctctcgttccatgtcggatcgcagacccgtgaaccgcag
atgtgggctgacacgcttgatcaggtggcgcaggtctggcgttcggccaagggcgctgga
catcagctgacacttctgaacattggcggcggttttcccgccagctatggcactgaggtg
atggcgccgaaccgctatgctcaggaagtaatggcgctggtgaacgcacggtttccggac
gcctgcgagatcatggcggaaccgggccgcgggctggtggcagaggcaggcgcaatcgca
gcagaagttctactggtgtcgcgcaaagatgcaggtgatctgcatcgctgggtctatctg
gacatcggcaaattctccggtctggccgaaaccatggacgaggcgatccgctatcgcatc
accacggatcatggtgatgggcaaaccggtccctgcattctggccggtccatcctgtgac
agtgcggatgtgctctatgaaaagcagctctatcagatgccgctggagctgaaagctgga
gaccgggtcgtgatacatgcctgtggcgcctatacgagcacctacgcatcggtcggcttc
aacggcttcccgccgctggatgtagtggtgatctga
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