Phaeobacter gallaeciensis DSM 26640: Gal_03359
Help
Entry
Gal_03359 CDS
T02968
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gal_03359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgd03019
]
Gal_03359
03016 Transfer RNA biogenesis [BR:
pgd03016
]
Gal_03359
Enzymes [BR:
pgd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Gal_03359
Messenger RNA biogenesis [BR:
pgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Gal_03359
Transfer RNA biogenesis [BR:
pgd03016
]
Prokaryotic type
tRNA degradation factors
Gal_03359
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AHD11078
LinkDB
All DBs
Position
3414220..3416358
Genome browser
AA seq
712 aa
AA seq
DB search
MFNVTKKSMQWGEETLTLETGKVARQADGTVIATLGETSVMANVTFARQQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTLSGAPFMGPIAAARVGFEGGEYVLNPTVDDMQDLRLNPDQR
LDLVVAGTKDAVMMVESEAYELTEAEMLGAVKFAHEQIQPVIDLIISLAEEAAKEPFDFQ
PADYSELFAAVKAAGEEQMRAAFAITDKQERTAAVAAARDAIKASLNEEQLEDANLGSAL
KKLEAGILRGDVVKTGKRIDGRSTTDVRAIESETGMLPRTHGSALFTRGETQALAVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
PTDFPYTVRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEDDGSYA
ILSDILGDEDHLGDMDFKVAGTDKGITSLQMDIKVAGITPEIMEKALDQAKDGRLHILGE
MAKALSETNAFSVHAPRIETMQIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGVIKI
ASADGTAIQKAYDMIHSIVAEPEEGAIYTGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKIVDQETGEEIKAEKKEDAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgttacaaagaaatcgatgcagtggggcgaagagacgctcacactggagacc
ggcaaggttgcccgtcaggctgatggcaccgtgattgccaccctgggcgagacctcggtc
atggcaaatgtcacctttgcccgccagcagaaaccgggtcaggacttcttccctctgacc
gtccactaccaggaaaaatactacgcggcgggcaaggtccccggtggttttttcaagcgt
gaagcacgccccaccgaaaaagaaacgctgactgcgcgtctgattgaccgtccgatccgc
ccgctgttcgtccccggcttcaagaacgaagttctggtgatgtgcaccgtgctgagccac
gatctggtcaacgatcccgacatggtcgccatgatcgcagcctctgcggcgctgaccctg
tccggcgcgcccttcatgggcccgatcgccgctgcgcgcgttggttttgagggcggcgaa
tacgtcctgaacccgactgtcgacgacatgcaggacctgcgcctgaaccctgatcagcgt
ctggatctggttgttgccggcaccaaagatgccgtgatgatggttgaatccgaagcttac
gagttgaccgaagccgaaatgctgggtgcggtgaaatttgctcatgagcagatccagccg
gtaatcgacctgatcatctcgctggcggaagaggcggcgaaagagccgtttgacttccag
cctgctgattattccgagctgttcgccgctgttaaggctgccggtgaagagcagatgcgc
gctgcatttgcgatcaccgacaagcaggagcgcaccgccgctgttgccgccgcccgcgac
gcgatcaaagcctcgctgaacgaagaacagctggaagatgccaacctcggttccgccctg
aagaagctggaagctggcattctgcgtggcgatgtggtcaagaccggcaagcggatcgac
ggacgttcgaccaccgatgtccgcgccatcgagtcggaaactggcatgctgccgcggacc
catggttcggcgctgttcacccgtggtgaaactcaggcactggctgtgaccacgctgggc
accggtgacgacgagcagttcatcgacgcgctgcacggcaatttcaaatccaacttcctg
ctgcactacaacttccctccctattcggttggtgaagtgggtcgtgtcggctccccgggc
cgtcgtgaaatcggtcacggtaagctggcatggcgcgcattgcaggcggttctgcctgcg
ccgaccgacttcccctacaccgtccgtgtggtgtcggagatcaccgaatcgaacggttcc
tcctcgatggcatccgtctgcggtggttcgctgtccatgatggacgccggcgttccgctg
aaagcaccggttgccggtgtggccatgggtctgatcctggaagacgacggctcctacgcg
atcctgtcggacattctgggcgacgaagaccacctcggcgacatggacttcaaagtggcg
ggtaccgacaagggcatcacctcgctgcagatggacatcaaggttgcaggcatcacgcct
gaaatcatggaaaaagcactggatcaggccaaggacggccgtctgcacatcctcggtgaa
atggccaaggctctgtcggaaaccaatgcgttctccgtccatgcgccgcgcatcgagacc
atgcagatcccgaccgacaagatccgtgaagtcatcggctccggcggtaaggtcatccgc
gagatcgtggaaacctccggcgcgaaagtcgacatcaacgacgacggcgtgatcaagatc
gcatcggccgacggcaccgccattcagaaggcctatgacatgatccactcgatcgtggca
gagccggaagaaggcgccatctacaccggtaaggtcgtgaagatcgtcgacttcggcgcc
ttcgtgaacttcttcggcaagcgcgatggcctggtacacgtgtcccagatcgaaaaccgc
cgcctgaaccatccttcggacgttctgaaggaaggccaggaagtgaaagtgaagctgctg
ggctttgatgatcgcggcaaggtccgcctgtccatgaagatcgtggatcaggaaaccggc
gaagaaatcaaagctgagaagaaagaagacgcggaataa
DBGET
integrated database retrieval system
