Phaeobacter gallaeciensis DSM 26640: Gal_03776
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Entry
Gal_03776 CDS
T02968
Name
(GenBank) Topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgd03032
]
Gal_03776
03400 DNA repair and recombination proteins [BR:
pgd03400
]
Gal_03776
Enzymes [BR:
pgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Gal_03776
DNA replication proteins [BR:
pgd03032
]
Prokaryotic type
DNA Topoisomerases
Gal_03776
DNA repair and recombination proteins [BR:
pgd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Gal_03776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
THDPS_N_2
Motif
Other DBs
NCBI-ProteinID:
AHD11485
LinkDB
All DBs
Position
pGal_A255:complement(62284..63261)
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AA seq
325 aa
AA seq
DB search
MKLVYYTDDQPGITRRRRGRGFSYYMPDGSHIGDATERARLNGLGVPPAYKDVWLCPLTN
GHLQATGRDARDRKQYRYHAEWQAHRAEQKFAQLGTFGGRLPVLRRWISDRLTGPVGDED
TAIAAVLALLDRGSLRIGNPSYTEENGSYGATTLRPRHVAFSGQVIQLRYTAKGGQTVEK
SLRGPALQRILERSQDLAGPELISWVDADGNTRAVRSEQVQEVLAKLCGDGVSAKTLRTW
NGSHAAFTVALDAPTLTITAMAEAAAERLHNTPTIARNSYIHPQIIGLAELPDPQRAARL
SALSQRQISGLRLGESRLIDLLNAS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggtctactatacggatgatcagcccggtattacccgccgccgtcgaggccgc
gggttttcctattacatgcccgatggcagtcatatcggcgatgcgacggaacgagcgcga
ctgaatggtttgggcgtcccgcctgcctataaagatgtctggttgtgcccactgaccaat
ggccaccttcaggccaccgggcgcgacgcccgcgatcggaagcaatatcgctatcacgct
gaatggcaggcgcaccgggccgaacagaaatttgcccagctgggcacctttggggggcgc
ctacccgtgttgcgccgctggatcagcgacaggttgaccggccctgttggagacgaagac
accgcgatcgcagccgtactcgccctgttggatcgcggctcgctcagaattggaaatccc
agctacaccgaggagaacggcagctacggcgccaccacattgcgcccgcgtcacgtcgcc
ttttcggggcaggtgatacagctgagatatacggcgaagggtggccagaccgtggagaaa
tccctgcgtggccctgcgctgcaacgcattcttgaacgctcacaggatctggccggtccc
gaactgatctcttgggtcgacgccgacggcaatacccgcgccgtgcgttcagagcaggtg
caggaggttttggctaaactctgcggcgatggggtctccgccaagaccctgcgcacctgg
aacggcagccatgccgcatttaccgtcgctctcgatgccccgaccctgaccatcaccgcg
atggcagaagccgctgcagagcggctacacaacaccccaaccatcgcccgcaacagctat
atccatccgcagatcatcggattggccgagctaccagaccctcaacgtgcagcacggctg
agcgctttgtcgcagcggcaaatcagcgggctacgcttgggtgagagtagactgattgat
ttgctgaatgccagctga
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