Pluralibacter gergoviae: LG71_01010
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Entry
LG71_01010 CDS
T03300
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pge
Pluralibacter gergoviae
Pathway
pge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LG71_01010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pge03019
]
LG71_01010
03016 Transfer RNA biogenesis [BR:
pge03016
]
LG71_01010
Enzymes [BR:
pge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LG71_01010
Messenger RNA biogenesis [BR:
pge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LG71_01010
Transfer RNA biogenesis [BR:
pge03016
]
Prokaryotic type
tRNA degradation factors
LG71_01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
DUF4172
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AIQ98566
UniProt:
A0AAI9GL46
LinkDB
All DBs
Position
complement(214882..217017)
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQASAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQTINDLVKEAGKPRWDWQPEAVNE
PLLARVTELAQSRLSDAYRITDKQERYAQVDVIKSEVIDTLVAEDESLDANELGDILHGI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTTEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKSAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAQHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTQPAAAPEAPAAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatcctatcgttcgcaagttccagtatggtcaacataccgtaaccctcgaaacc
ggcatgatggcgcgtcaggcttctgctgccgtcatggtaagcatggatgacactgcggtt
ttcgttaccgttgttggtcagaaaaaagccaagccgggccaggacttcttcccgctgacc
gtgaactatcaggagcgtacctacgctgccggtaaaatcccgggcggcttcttccgccgc
gaaggccgtccgagcgaaggcgaaaccctgattgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggtttcgttaacgaagtgcaggttattgccaccgttgtttccgta
aacccgcaggttaacccggacatcgtcgcgatgatcggtgcttctgccgcgctatccctg
tccggtattccgttcaacggcccgatcggcgccgcgcgcgtgggctacatcaacgaccag
tacgtgctgaacccgacccaggaagagctgaaatccagcaaactggacctggtggttgcc
ggtaccgaagccgccgtgctgatggtggaatccgaagccgaactgctgagcgaagaccag
atgctgggcgccgtggtatttggccacgagcagcagcagatcgtcatccagaccatcaac
gatctggtgaaagaagcgggcaaaccgcgctgggactggcagcctgaagccgttaacgag
ccgctgctggcgcgcgttaccgagctggcgcagtctcgcctgagcgacgcctaccgcatc
accgacaagcaggagcgctacgcgcaggttgacgtcatcaagtctgaagtcatcgacacc
ctggttgccgaagacgaatccctcgacgctaacgagctgggcgacatcctgcacggcatt
gagaaaaacgtcgttcgcagccgcgtgctggccggcgagccgcgcatcgacggtcgtgaa
aaagacatgatccgcggtctggatgtgcgcaccggcgtactgccgcgcacccacggttcc
gcgctgttcacccgcggcgaaacccaggcgctggtcaccgcgaccctcggcaccgcccgc
gacgcgcagaacattgatgagctgatgggtgaacgtaccgacagcttcctgttccactac
aacttccctccgtactccgtcggcgaaaccggcatggtcggttcaccgaagcgtcgtgaa
attggtcacggtcgcctggcgaagcgcggcgtgctggccgtgatgccgaccaccgaagag
ttcccgtataccgttcgcgtggtgtctgaaatcaccgaatctaacggctcttcctccatg
gcttccgtgtgcggcgcctcgctggcgctgatggacgcgggcgtgccggtgaaatctgcg
gttgctggtatcgcgatgggtctggtgaaagagggcgacaactacgtcgtactgtctgac
atcctcggcgacgaagatcacctcggcgacatggacttcaaagtggcgggctcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggcatcaccaaagagatcatgcag
gtggcgctgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggcg
atcaacgcgccgcgcggcgatatctctgaattcgcaccgcgtatccacaccattaagatc
agcccggacaagatcaaagacgtgatcggtaaaggcggctcggtgatccgcgcgctgacc
gaagagaccggcaccaccatcgaaatcgaagatgacggtaccgtgaagatcgcagcgacc
gacggcgacaaagcgcagcacgctatccgccgtatcgaagagatcaccgctgaaatcgaa
gttggccgtatctacaatggtaaagtaacccgcatcgttgactttggcgctttcgttgcc
atcggcggcggtaaagagggtctggttcacatctcgcagatcgccgacaagcgcgtagag
aaagtgaccgattacctgcagatgggtcaggaagtaccggttaaagttctggaagttgac
cgccagggccgcgtacgtctgagcattaaagaagcgaccgagcagactcagcctgccgcc
gcgccggaagcaccggctgcggaacagggcgagtaa
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