Pluralibacter gergoviae: LG71_03230
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Entry
LG71_03230 CDS
T03300
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pge
Pluralibacter gergoviae
Pathway
pge00541
Biosynthesis of various nucleotide sugars
pge01100
Metabolic pathways
pge01250
Biosynthesis of nucleotide sugars
Module
pge_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pge00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LG71_03230 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pge01005
]
LG71_03230 (rfaD)
Enzymes [BR:
pge01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LG71_03230 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pge01005
]
Core region
LG71_03230 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Ldh_1_N
adh_short
Motif
Other DBs
NCBI-ProteinID:
AIQ98977
UniProt:
A0A089PGT6
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All DBs
Position
complement(676451..677383)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEDFGDIEAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEQPLNVYGYSKFLFDEYVRQILPEADSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDGFKRDFVYVGDVAAVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAFHKKGSIEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttattggcagcaatatcgttaaagcgctgaat
gacaagggcatcaccgacattctggtggtcgacaacctgaaagacggcaccaaattcgtc
aacctggtggatctgaatatcgccgactacatggataaggaagatttcctgattcagatt
atggccggggaagattttggcgatatcgaggcggttttccacgaaggcgcctgctcctcc
accaccgagtgggacggcaagtacatgatggacaacaactatcagtactccaaagagctg
ctgcactactgcctggagcgcgaaattccgttcctgtacgcctcttccgccgccacttac
ggcggacgcacctccgactttattgaatcccgcgagtacgagcagccgctgaacgtctac
ggctactctaagttcctgtttgacgaatacgtgcgccagatcctgccggaagcggactcg
cagatcgtcggcttccgctacttcaacgtctacggcccgcgcgaaggccacaagggcagc
atggcgagcgtggcgttccacctcaacacccagctcaacaacggcgaaagcccgaagctg
tttgaaggcagcgacggctttaagcgcgacttcgtctacgttggcgacgtggcggcggta
aacctgtggttcctcgaaaacggcgtctccggcatcttcaacctcggcaccggccgggcg
gagtccttccaggcggtggccgacgccactctcgccttccacaaaaaaggcagcatcgag
tacattccgttcccggagaagctcaagggccgctaccaggcgtttactcaggcggacctg
accaacctgcgcgccgccggctacgacaagccgtttaagaccgttgccgaaggcgtagcg
gagtatatggcctggctgaaccgcgacgcataa
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