Pluralibacter gergoviae: LG71_18165
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Entry
LG71_18165 CDS
T03300
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pge
Pluralibacter gergoviae
Brite
KEGG Orthology (KO) [BR:
pge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pge03016
]
LG71_18165
Enzymes [BR:
pge01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LG71_18165
Transfer RNA biogenesis [BR:
pge03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LG71_18165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
AIR01700
UniProt:
A0AAW8HI09
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All DBs
Position
3868144..3870081
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AA seq
645 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHSEKDKESAEPEELVEPFLTRFVGRVQRKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRSFYAELTQFITYGEDHFVPWWVTLARHNLEKEAPDGIAT
EMQDEGLERRDLTGLDFVTIDSASTEDMDDALYAEEAADGRLHLTVAIADPTAWIVEGSK
LDKAAKVRSFTNYLPGFNIPMLPRELSDDLCSLRANEPRPVLACRMIIDADGAIADDIEF
FAATIESKAKLAYDSVSDWLEGNGGWTPPGDAIAAQITLLARICALRGEWRHNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHTGFD
AAKTEQLAELLKTHDVHVDAQEVLTLNGFCKLRRELDAMPSGFLDSRIRRFQSFAEISVE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESPARPQDDITVQMAERRRANRM
AERDVADWLYARFLKDKAGTDTRFSAEIIDISRGGMRVRLVDNGAVAFIPAPFIHAVRDE
LVCSQENGTVQIKGETAYRVSDVIDVTIAEVRMETRSVIARPFRA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggacaatccgctgctcgcgcagttaaaacagcaacttcattcccagactccc
cgcgctgaaggggtcgttaaaggcaccgaaaagggcttcggatttctcgaagtcgatgcc
cagaaaagctatttcattccgccgccgcagatgaagaaagtgatgcacggcgaccgcatt
attgccgttatccacagcgagaaagacaaagagagcgcggagccggaagagttggtcgag
cccttcctgacccgcttcgtcggccgcgttcagcgtaaagacgatcgcctgtctattgtc
ccggatcatccgctgctgaaggacgctatcccctgccgcgccgcccgcggcgttgagcac
gattttaaagaaggtgactgggccgttgcggaaatgcgccgtcacccgctgaagggcgac
cgcagtttctacgcggagctgacccagttcattacctacggcgaagaccacttcgtgccg
tggtgggtgaccctggcgcgccataacctggaaaaagaggcgccggacggtatagccacc
gaaatgcaggatgaaggccttgagcgccgcgacctgaccggcctcgactttgtcaccatc
gacagcgccagcaccgaagatatggatgatgcgctgtacgcggaagaagcggccgacggc
cggctgcacctgaccgtcgccattgccgatccaacggcgtggattgtcgaaggcagcaag
ctggataaagcggcgaaggttcgctccttcaccaactatctgccgggcttcaatattccg
atgctgccgcgcgagctgtctgacgacctctgctcgctgcgcgccaacgagccgcgcccg
gtgctggcctgccggatgattatcgacgccgacggcgccattgccgatgacattgaattt
tttgccgccaccatcgaatcgaaggcgaagctggcctacgacagcgtctccgactggctg
gaaggcaacggcggctggacgccgccgggcgacgccattgcggcgcagatcacgctgctg
gcgcgcatctgcgccctgcgcggcgagtggcgccacaatcacgccctggtatttaaagac
cggccggactaccgcttcgtgctgggcgaaaagggcgaagtgctggatatcgtcgccgaa
ccgcgccgcatcgctaaccgcattgttgaagagtcaatgatcgccgccaacatctgcgcc
gcccgcgtgctgcgcgacaagctcggcttcggtatctacaacgtgcacaccggctttgac
gcggcgaaaacggaacagctggccgagctgctgaagacccacgatgttcacgttgacgcc
caggaagtgctgaccctcaacggcttctgcaagctgcgccgcgagctggacgccatgccg
tccggcttcctcgacagccgcattcgccgcttccagtccttcgcggaaatcagcgttgag
ccgggcccgcactttggccttggtcttgaggcttacgccacctggacctcgcctatccgc
aaatacggcgacatggtcaaccaccgcctgctgaaggcgatcatcaaaggggaatctccg
gcccgcccgcaggacgatattaccgtacagatggccgagcgccgccgcgccaatcgtatg
gcggagcgcgacgtggccgactggctgtatgcccgcttcctgaaggataaagccggcacc
gatacccgcttcagcgcagaaatcatcgatatcagccgcggcggtatgcgcgtgcggctg
gtggataacggcgcggtggcctttattccggcgccctttatccacgcggtgcgcgacgag
ctggtctgcagccaggagaacggcaccgtgcagatcaaaggtgaaacggcctaccgggtt
agcgacgtgattgacgtcaccatcgccgaagtgcgtatggaaacccgcagcgtcatcgcc
cgacctttcagggcctaa
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