Pluralibacter gergoviae: LG71_24780
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Entry
LG71_24780 CDS
T03300
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pge
Pluralibacter gergoviae
Brite
KEGG Orthology (KO) [BR:
pge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pge03021
]
LG71_24780
Transcription machinery [BR:
pge03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LG71_24780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AIR02913
UniProt:
A0AAW8HM33
LinkDB
All DBs
Position
5306101..5309007
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPATGENRLYARNDSPITRVMFNPGDV
ITSHEGWQLRVDEVKEENGLLAYTGTRLDSDEADVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLVIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DATNPFETEQLIICSLDFVRRSKQRLEHLCDAEWDIMVVDEAHHLVWSEEAPSREYQAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPSRFHDFAQFVEEQQNYRPVADAVSLLL
SGDRLNNDQLNALSELIGEQDIEPLLQTANSDRDGAESARQELISMLMDRHGTSRVLFRN
TRNGVKGFPQRELHTIKLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWFHEGLDAFEHTCPTGRAIYDSVHGELINYLAAPEST
DGFDELIKRCREEHDALKAQLEQGRDRLLEIHSSGGAKGQQLAESIEEQDDDTGLISFAM
NLFDIIGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTVTFERDVALSREDAQFLTWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLHRFLPPTP
VRMLVDKAGNNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQVEKAAQ
ALIESARREADEKLSAELARLEALKAVNPNIRDDELEAIESNRQQVLESLAQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaactgggattaggg
acggtggttgcgctggacgcgcggatggtaaccctgctcttcccggctaccggagaaaat
cgactgtacgcccgcaatgattccccaatcacccgcgtgatgttcaatccgggcgatgtc
atcaccagccacgaaggctggcagctgcgcgttgatgaggtaaaagaagagaatggcctg
ctggcctataccggcacccggctcgacagcgacgaggccgacgttaccctgcgcgaagtg
ctgctcgacagcaagctggtgttcagcaagccgcaggaccgcctgttcgccgggcagatt
gaccgcatggaccgcttcgccctgcgctaccgcgcccgcaaataccagagcgaacagtac
cggatgccgtggagcggcctgcgcggccagcgcaccagcctgatcccgcaccagctgaat
atcgcccacgacgttggccgccgccacgcgccgcgcgtgctgctggcggacgaagtgggc
ctcggtaagaccattgaagccgggatgatcctgcaccagcagctgctttccggtgccgcc
gagcgcgtgctggtgatcgtcccggaaactctccagcaccagtggctggtcgagatgctg
cgccgcttcaacctgcgcttcgccctgtttgacgacgagcgctacgccgaagcccagcac
gatgcaaccaacccgttcgaaaccgagcagctgattatctgctcgctggacttcgtgcgc
cgcagtaaacagcgtctggagcacctgtgcgacgccgagtgggacattatggtggtggac
gaagcccaccacctggtgtggagtgaggaggccccgagccgcgagtatcaggccatcgaa
cagctggccgaacgcgtgccgggcgtgttgctactcaccgccaccccggaacagctgggg
atggagagccacttcgcccgcctgcgcctgctggacccgagccgcttccatgattttgcc
cagtttgtcgaagagcagcagaactaccgcccggtggccgacgccgtttccctgctgctg
agcggcgacaggctcaacaacgaccagctgaacgccctgagcgagctgattggcgaacag
gatatcgagccgctgctgcagaccgccaacagcgaccgcgacggcgctgaaagcgcccgt
caggagctgatttcgatgctgatggaccgccacggcaccagccgggtgctgttccgcaac
acccgcaacggcgtcaaaggcttcccgcagcgcgagctgcacaccatcaagctgccgctg
ccgacccagtatcagaccgcgattaaagtctccggcattatgggggcgcgcaaaactgcc
gaagagcgcgcccgcgatatgctctatccggagcagatctatcaggagtttgaaggcgat
accggtacctggtggaacttcgacccgcgcgtcgagtggctgatgggctatcttaccagc
caccgctcgcagaaggtgctggtgatctgcgctaaagccgccaccgccctgcagctggag
caggtgctgcgcgagcgcgagggcatccgcgcggcggtgttccacgaaggtatgtcgatt
atcgaacgcgaccgcgccgcggcgtggtttgccgaagaggacaccggcgcccaggtgctg
ctgtgctctgaaatcggctccgaaggccgcaacttccagttcgccagccagctggtgatg
ttcgatctgccgttcaacccggacctgctggagcagcgcatcggccgcctcgaccgcatc
ggccaggcccacgatattcagatccacgtcccgtacctcgaaaaaaccgcccagtcggtg
ctggtacgctggttccacgaagggctggacgccttcgagcacacctgcccgaccggccgc
gcgatatacgatagcgtccacggggagctgattaactatctcgccgctccggagagcacc
gacggctttgacgagctcattaagcgctgccgcgaagagcacgacgccctcaaggcgcag
ctggagcagggccgcgaccgcctgctggagatccactccagcggcggcgcgaagggtcag
cagctggcggagagcatcgaagagcaggatgacgacaccggtcttatcagcttcgccatg
aacctgttcgatatcatcggcatcaaccaggacgaccgcggcgataacctgatcgtgctg
acgccgtccgaccatatgctggtgccggacttcccgggcctgccggaagacggctgcacc
gtcaccttcgagcgcgacgtggcgctctcccgcgaagacgcccagttcctcacctgggag
catccgctgatccgcaacggcctggatcttattctctccggcgataccggcagcagcacc
atttccctgctgaagaataaggccctgccggtcggcaccctgctgctggagctgatttac
gtggttgaggcccaggcgccgaagcagctgcagctgcatcgcttcctgccgccgacgccg
gtgcgtatgctggtcgacaaagccggcaataaccttgccggccaggtggagtttgagagc
tttaaccgccagctgagcgcggtcaaccgccacaccggcagcaagctggtcaacgcggtg
cagcaggacgtgcacgcgatcctgcagcagggcgaagcgcaggtggaaaaagccgcccag
gcgctgattgagtccgcccgccgcgaagccgacgagaagctgagcgccgagctggcgcgc
cttgaagcgctgaaggcggtgaaccccaacatccgcgacgacgagttggaagcgatcgaa
agcaaccgtcagcaggtgctggagagcctcgcccaggccggctggcggctcgatgcgctg
cgcctgatcgtcgtgacgcatcagtaa
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