Pseudochaenichthys georgianus (South Georgia icefish): 117439091
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Entry
117439091 CDS
T09629
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
pgeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117439091
03015 mRNA surveillance pathway
117439091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117439091
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117439091
mRNA cycle factors
P-body specific factors
117439091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Motif
Other DBs
NCBI-GeneID:
117439091
NCBI-ProteinID:
XP_033930716
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All DBs
Position
23:complement(24295581..24308824)
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AA seq
665 aa
AA seq
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MTDVCFATISSMPAERKRSLNMDEKDVCTFSNKDKEKERDGERRPSSARDKGKDEAKMSG
KKDSSKEEKRKRLEEEKKKREEKDRKKKEEEKVKAEEEQKKKEEEEKKLQEEQEKQLQEE
EARKQREEEAALLKEKEESHQLHQEAWERHHCRKELRVKNQNAQEGRPEEAFFSRLDSSL
KKNTAFVKKLRTLTEQQRDSLSNDFGSLNLSKYIGEAVSSVVEAKLKISDVGCSVHLCSL
FHQRYTEFAPLLLQAWKKHFEARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIY
EQLKSIIGTDRDTHTHVSVVISFCKHCGDDIAGLLPRKVKAATDKFALSFPPSEIIGTEK
QQTFQNLLREYFTSLTKHLKKDHRELQNTERQNRRILHSKGELSEDRHKQYEEFATSYQK
LLANTQSLADLLDENMPDLPQDKTVQEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFY
ENLVDLKAFVPAILFKDNDKGKDKDEGKDGKDGKEAAASTTEELELELEALDIADEPLEL
EGPDEAESEELAKKLLDEQEQEDEEANTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFC
MNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVGEDLCSMLKGDFRFHV
RPLIY
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtttgttttgctacaattagcagtatgcctgctgaacgcaaacgctcatta
aacatggatgaaaaagatgtttgcaccttcagcaacaaggacaaggagaaggagcgagac
ggcgagaggagaccatcgtccgcccgggacaaagggaaagacgaggccaaaatgagcggg
aaaaaagacagcagcaaggaggagaagaggaagcgcctcgaggaggaaaagaagaagagg
gaagaaaaggatcgtaaaaagaaagaggaggaaaaagtgaaagcggaggaggagcagaag
aagaaagaggaagaggagaaaaagctgcaggaggagcaggagaagcagcttcaggaggag
gaggccaggaaacagcgagaggaggaggcggcgctcctgaaggagaaggaggagagccac
cagctgcaccaggaggcctgggagcgccaccactgcaggaaggagctccgcgtcaagaac
caaaacgcccaggagggtcgacccgaggaggcgttcttcagccgcctggactccagcctg
aagaagaacacggccttcgtgaagaagctgcgaacgctcaccgagcagcagcgcgactcg
ctctccaacgacttcggctccctgaacctcagcaagtacatcggcgaggcggtgagctcc
gtggtggaggccaagctgaagatctccgacgtgggctgctccgtccacctctgctccctc
ttccaccagcgctacaccgagttcgctccgctgctcttacaggcctggaagaagcacttt
gaggcgaggaaggaggagaaggcgcccaacgtgagcaagctgcgaacggacctgcgtttc
atcgccgagctcaccatcgtcgggcttttcacagacaaggaggggctctctctgatctac
gagcagctgaagagcatcatcgggacggaccgcgacacgcacactcacgtgtcggtggtc
atcagcttctgtaagcactgcggggacgatatcgccgggctgctgccccgaaaagtgaaa
gcggccactgacaagttcgctctgagcttccctccgagcgagatcatcggcacggagaag
cagcagaccttccagaacctgctgagggaatacttcacctcgctcaccaagcacctgaag
aaggaccaccgcgagctgcagaacaccgagaggcagaacaggcgtatcctccactccaaa
ggggagctgagtgaggaccgacacaaacaatatgaagagtttgcgacgtcctaccagaag
ctgctggccaacactcagtctctggccgacctgctggacgaaaacatgcccgaccttcct
caggacaagacggtgcaggaggagcacggccctgggatcgacatcttcactcccgggaag
cccggagagtacgacctggaaggcgggatctgggaagacgaagacgctcgtaacttctac
gagaacctggtggacttgaaggccttcgtgcccgccatcctcttcaaggacaacgacaag
ggcaaagacaaggatgaaggcaaagacgggaaagacgggaaggaggctgcagcgagcacc
acggaggagctggagctggagctcgaggctctggacatcgcagacgaacctctggagctg
gagggacccgacgaggcggagagcgaagagctggccaagaaactgctggatgagcaagaa
caagaggatgaagaggccaacacagggtctcacctcaagctgatagtggacgccttcatc
cagcagctgcccaactgtgtcaacagagacctcatcgacaaggcggccatggatttctgc
atgaacatgaacaccaagtccaaccggaggaaactggtccgagcgctcttcaccgtcccc
aggcagaggttggacctcctccccttctactctcgcctggtggccactctccatccctgc
atgtcggacgtgggtgaggatctgtgctccatgctgaagggagacttcaggttccacgta
cgtcctcttatatactaa
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