Pseudochaenichthys georgianus (South Georgia icefish): 117439132
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Entry
117439132 CDS
T09629
Symbol
atp2b1a
Name
(RefSeq) plasma membrane calcium-transporting ATPase 1 isoform X1
KO
K05850
P-type Ca2+ transporter type 2B [EC:
7.2.2.10
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117439132 (atp2b1a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117439132 (atp2b1a)
Enzymes [BR:
pgeo01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
117439132 (atp2b1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase_C
E1-E2_ATPase
ATP_Ca_trans_C
Cation_ATPase_N
Cation_ATPase
Hydrolase
Hydrolase_3
DUF3671
Afi1
PIP5K
Motif
Other DBs
NCBI-GeneID:
117439132
NCBI-ProteinID:
XP_033930777
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Position
23:complement(7827958..7871293)
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AA seq
1282 aa
AA seq
DB search
MANNSYSGVKNSMVEANHDGEFGCSLKDLRALMELRGAEAIGKIGESYEDVQGLCNRLKT
SPIDGLSGQPGDIEKRKTVFGENLIPPKKPKTFLQLVWEALQDVTLIILEVAAIVSLGLS
FYRPPDADRENCGRAAGGVEDETESEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGL
QSRIEQEQKFTVVRGGQVIQIPVAEIVVGDVAQIKYGDLLPSDGVLIQGNDLKIDESSLT
GESDLVKKTLEKDPMLLSGTHVMEGSGKMLVTAIGVNSQTGIIFTLLGSAEDDEEEEEEK
KKEKEEKKKQRKNKKQEGAAENRKKAKAQDGAAMEMQPLNSEEADAEERKKSNTSKKEKS
VLQGKLTKLAVQIGKAGLVMSAITVIILVVLFVVDTFWIQNLPWVKDCTPIYIQFFVKFF
IIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL
TMNRMTVVQAFIGEKHYKKVPEPENIPSSILDILILGIAVNCAYTTKIMPPEKEGGLPRQ
VGNKTECSLLGFSNDLKRDYQTIRNEIPEEKLYKVYTFNSVRKSMSTVLKMADGSFRMFS
KGASEILLKKCYKVMTANGESKVFRPRDRDDMVKKVIEPMASEGLRTICLAYRDFPVSEG
EPDWDNENDILSGLTCLSVVGIEDPVRPEVPDAIKKCQRAGITVRMVTGDNINTARAIAT
KCGILLPGDDFICIEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGI
IDSTVLEKRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVK
AVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASL
ALATEPPTEALLLRKPYGRNKPLISRTMMKNILGQGVFQLITIFTLLFAGEKIFDIDSGR
NAPLHAGPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNLIFCSIVFGTFIIQ
IVIVQFGGKPFSCVALSLDHWLWCTFLGFGSLLWGQVISSIPTSRLKFLKSAGHGTQKDE
IPDEELDELDDNDEIDHAERELRRGQILWFRGLNRIQTQMDVVSAFQSGTSFQGALRRQA
SNSSQQQHDIRVVNAFRSSISLYDGQDKPDSRSSIHNFMNHPEFRIEDSEPHIPLIDDTD
AEDDAPTKRNSSSPRNTTPTPPSPTPSHTTIAPTVIPTTPVSPSPNQNNNAVESGNHLLP
EGPKSGTPSAPGSPLHSLETSL
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaactcgtacagcggcgtgaagaactccatggtggaggccaaccacgatgga
gagtttggctgttcgctcaaagacctgcgcgccctcatggaactgagaggcgcagaggcc
ataggcaaaattggggaatcttatgaggatgttcaaggactctgcaaccggttaaaaaca
tcacctatagatggtctaagtggacagcctggagacatcgagaagcggaaaacagtgttt
ggggaaaatttgataccgcccaaaaagcccaaaactttcttacagttagtgtgggaggcg
ctacaggatgtcacactgattattctagaagtggcagccatagtttcactaggcctttct
ttttatagacctccagatgccgatagagaaaactgtggaagggcagctggcggtgtagag
gatgaaactgagtcagaagcaggctggatcgagggcgctgccattcttctgtctgttatc
tgtgtggtgctggtgacagccttcaatgactggagtaaagagaagcagtttaggggcctc
cagagccgcatcgagcaggaacagaaatttactgtcgtccgtggaggacaagtcatccaa
attcctgtggctgagatcgtggtcggcgacgttgcacaaataaaatatggtgatcttttg
ccttctgacggggttctcatccaaggcaatgatctgaagatcgatgagagctccctcaca
ggggagtcggaccttgtcaagaaaacactagaaaaagatcccatgctcttatcaggcacc
catgtaatggaaggctcagggaaaatgttggttacggctataggggtcaactctcaaact
ggaattatcttcactttacttgggagcgccgaggatgatgaggaagaagaagaagaaaag
aaaaaggaaaaagaggagaagaagaaacagagaaaaaacaagaagcaggagggagcggcg
gagaatcgtaagaaagctaaagcacaggatggtgctgcgatggaaatgcagcccctgaac
agtgaggaagctgatgcagaggagaggaagaaatccaacacgtcgaagaaagagaagtct
gttctccagggaaaactgaccaagctagccgtacagattggaaaagcaggactggttatg
tctgccatcactgtcatcatcctggtggtgctgtttgtagtagacaccttctggatccag
aatcttccttgggtcaaggactgcacacccatttacattcagttcttcgtgaaattcttc
atcattggcgtcactgtcctggtggttgctgttcccgaaggcctgcctctggctgtaaca
atctccctggcatactctgttaagaaaatgatgaaagacaacaacctagtaaggcatttg
gatgcctgtgagactatgggcaatgctaccgccatctgctctgacaaaacaggaacactc
accatgaaccgcatgactgtggtgcaagccttcatcggggagaagcactacaagaaggtc
cctgagccagagaacatcccctcctccattctagacattctaattctgggcatcgctgtc
aactgcgcatacactactaagatcatgcctccagagaaagaaggcggcctgccacggcaa
gttggtaacaagactgaatgttccttgcttggtttttccaatgacttgaagcgcgactac
cagaccatacgcaacgagatccctgaggagaaactctacaaagtctacacctttaactcg
gtccgcaagtccatgagcaccgtgttgaaaatggctgatggcagcttccgtatgttcagc
aaaggggcctcagaaattctcctaaaaaagtgctataaagtcatgacggcaaatggtgag
tccaaggtgttccgcccacgggacagagacgacatggtgaagaaagtgatcgagcccatg
gcctcagagggcctgaggaccatatgcctggcatacagagacttccctgtctctgagggg
gagcctgactgggacaatgagaatgatattctcagtggactgacctgcctcagcgtggtg
ggcattgaagaccccgtgagacccgaggtcccagatgccatcaagaaatgccagcgcgcc
ggtatcacagtgcggatggtgactggggacaacatcaacacagctcgagccatcgccacc
aagtgtggcatcctactgcccggagacgacttcatctgcatagagggaaaagagttcaac
cgaaggatacgcaatgagaaaggagagatcgaacaagagcgcattgacaagatctggccc
aaactacgagtactggcacgctcttcccccacagacaaacacaccctagtgaaaggtatt
attgacagtacagtgttagaaaaaagacaagtagtagctgtgacaggagatggtaccaat
gatggtcccgccttgaagaaagctgatgttggctttgccatgggtattgccggcacagat
gtagctaaggaggcctctgacatcatcctgactgacgacaatttctccagcatcgtcaag
gccgtcatgtgggggcgcaacgtctacgacagcatctccaagttcctccagtttcagcta
actgtcaacgtggtggctgtcatcgtagcattcacaggagcctgcatcacacaggactct
ccactgaaagcagtccagatgttatgggtcaacctcatcatggacacttttgcttcactt
gccctggccacggagccccctacagaagccctgctgcttaggaagccatatggccgcaac
aagcctctcatctcccgcaccatgatgaagaacatcctgggtcagggagtgttccagcta
atcaccatcttcactctgctctttgccggagagaaaatctttgatatcgacagcggcagg
aatgcaccgctccacgctggaccctctgaacactacaccattgtcttcaatacctttgta
ctgatgcagcttttcaacgagatcaatgcccgcaaaatccatggtgaaaggaatgtcttt
gaaggcatcttcaacaacctcatcttctgtagtattgtctttggtaccttcattatccag
atcgtcatagtgcagtttggtgggaagccgttcagctgcgtggctctgagcctcgaccac
tggctatggtgcactttcttaggctttggctctctgctatggggacaggtcatctcctcg
atacctaccagccgcttaaaattcttgaaatcagcgggccatggcacccagaaggatgag
atcccggacgaggagctggacgagctggacgacaacgatgagatcgaccacgcagagcgg
gagctccgtcgaggccagatcctctggttcagaggcctcaaccgcatccagactcagatg
gatgtagtgagtgcgttccagagtggaacttcctttcagggggctctaaggcggcaggcc
tccaactccagccaacaacagcacgatatccgggtggtgaatgcattccgcagctccatc
tccctctatgacgggcaggataagcccgactcgcggtcatccatccacaacttcatgaac
caccccgagttccggatagaggactctgagccccatattcccctcatagatgacaccgac
gcggaggacgacgctcctaccaagcgcaactcctccagcccccgcaacaccacgcccacg
ccgccctcacccacaccctcccacaccaccatcgcacccaccgtcatccccaccacgccg
gtctctccctccccaaaccagaacaataacgctgtggagagcggtaaccacctcctccca
gagggccccaaatcaggaaccccctcggccccggggagccccctacacagcctggagacc
tccctttga
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