Pseudochaenichthys georgianus (South Georgia icefish): 117439176
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Entry
117439176 CDS
T09629
Symbol
nup37
Name
(RefSeq) nucleoporin Nup37
KO
K14302
nuclear pore complex protein Nup37
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117439176 (nup37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117439176 (nup37)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117439176 (nup37)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117439176 (nup37)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117439176 (nup37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
117439176
NCBI-ProteinID:
XP_033930842
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Position
23:13180096..13192997
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AA seq
325 aa
AA seq
DB search
MQEDSSRTPSYTVTCEDYVHVVEFSPFSSGTPASLLAYGGNQYVVVGTCLFQEEDMDIEG
IEFNVLRAFHHELRVDALAWSPESRLDRIPTIRFCTAAADRKLRLLTSDLQDRHEVKVME
GHTGYINHLVFEPTEGKQIASVSDDHTCRVWDLDGNESTTLRLRSPGISVCWHPEEAFKL
MVAEKKGTIRFYDLVTQQAILSLDCGQSPLMSADWCLTNTIKVGAVAGNDWLIWDITRSS
YPQEKRPAHIDKARLFKWSRANQNLFATTGCPGKICSQLFIHHLGHPQPVTIGSATVGSG
LSWHRTLPLCVIGGDRKLCFWMTEM
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggattctagccgaactcccagttacactgtgacatgcgaggactatgttcat
gtggttgaattcagtcctttcagctctggtacccctgcctctctcctggcttacggtggg
aaccaatatgtggttgtgggcacctgtctattccaggaggaggatatggacattgagggg
attgaattcaatgttcttcgagctttccatcatgaattacgtgtcgatgctctcgcctgg
agcccagagtcccggctagacagaatacccactatcagattttgcactgctgcagctgac
agaaagctacgcctgctgacttctgatcttcaggataggcatgaagtcaaggtaatggag
ggccacaccggctacattaaccatttggtgttcgagccaacagaggggaaacaaattgct
tccgtcagtgatgaccacacttgcagggtgtgggacctggatggaaatgaaagcacgact
ctcagacttcgctccccgggcatcagtgtgtgctggcaccccgaagaagcctttaagtta
atggtggcagagaagaagggaactattcgcttctatgacctggttacccagcaggccatt
ctgtccctggactgtggtcagtccccactcatgtccgcagactggtgcctcacaaacacc
atcaaagtgggggctgtggccggcaacgactggctcatctgggacataactcgctccagt
tacccccaggaaaaacgaccagctcacatagataaagcaaggttattcaagtggtctcga
gccaatcaaaacctctttgccaccactggatgtccgggaaagatctgtagtcagttattt
atccaccatcttggtcacccgcagccggttactattggatctgccacagtgggatcgggc
ctcagctggcaccgcacgctcccgctctgcgtgatcggcggcgacaggaaactctgcttt
tggatgactgaaatgtag
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