Pseudochaenichthys georgianus (South Georgia icefish): 117439187
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Entry
117439187 CDS
T09629
Symbol
rint1
Name
(RefSeq) LOW QUALITY PROTEIN: RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117439187 (rint1)
Membrane trafficking [BR:
pgeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
117439187 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
GlnE
Motif
Other DBs
NCBI-GeneID:
117439187
NCBI-ProteinID:
XP_033930864
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All DBs
Position
23:17699945..17709375
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AA seq
796 aa
AA seq
DB search
MAAPTTTVQTMNSLTDTLLKPVYANSQGMDSVSADSGTLQDYLLDFMEKEVGSDLKSLKN
VGHLLEKLREENSVLEEQVLTDASSVPPKVSAALSAAEEASCSVEDVLQREALISKRLHQ
HLQDAQPWMDKLDQTLHKVNTIERHVKYLRCLQHIEELSAAVQQCLMTSSVWEAIRAVDS
MAALDAGLNQSGCSHLQGFLQETLHFWHKIIKDRLTTDFEKVLIQLHWPFIAPPIQTLTP
TANGQEISSQLELLVSQLLALQNSDDLISQRALASCQGVPAIQPASPAPPPSQAPPLCLP
IQIMLLPLSKRFRYHFYGNRQTNTLSKPEWYLTQVLMWIGNSKTFMEERIQPILDRAGAT
TSAMVELCRGLLSLVQEKVASDASRLLYDDALFCHLVEEVLQFEKELRGNHSFPAVLPGL
LHLLLEDAILQKWLTVEKKMAVEKMDAMLSSEGAWSSQYKDISDMDELKAPDCAETFMTL
LQVITERYRSLPCPSAQLKFLGLQKELVDDFRIRLTQVMKEESRCPLGARYCAILNAVNY
ISTILGDWGDNVFFLQLQQAAVSLGEEGVLGGLGVLEVGRLASLEGSLFEGLLALLDRLK
GDMMGRLLEWTMREITEKVRPYGQDRWLSLPPQQDQSMTLSSSACPMMLCVRDRLLNLHQ
VLSFSLFQLAWQGLAERLDNVLYQEVVLSNHFSEGGAAQLQFDMTRNLFPLFGHYCKRPE
NFFKHVKEACILLSLSVGSAILLRNLLKESMEEEAGGGAAAGDPPPESALNELGVYCLAP
CDVLILLNLRAFWPGQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccacaacaacagtgcaaaccatgaactcactgacagacactttgttgaag
cccgtttacgcaaacagccaaggtatggactctgtttcagcagattcgggcacactgcag
gactatttattggatttcatggaaaaagaagtcggcagtgacctgaagtccctgaaaaat
gttggccacttgctggagaaactgagagaggaaaacagcgtcctggaggaacaggtcctg
acagacgccagctcggtgcctcctaaagtgtctgcagctctgtctgctgctgaggaggcc
agctgttctgtggaggatgtactgcagagagaggcacttatctccaaaagactgcaccag
cacctacaggatgcccagccttggatggataaacttgaccaaacgctacacaaagtcaac
acaatagagagacatgtgaaatacctacgatgcctccaacatatagaggaactcagcgct
gcagtccagcagtgtctgatgaccagcagtgtgtgggaggccatccgggcggtggacagc
atggcggctctggacgctggactgaaccagtcgggatgctctcacctgcagggcttcctc
caagagacactccacttctggcacaagatcatcaaagaccgactgaccactgattttgag
aaagtcttaattcagcttcattggccgttcatcgccccccccatccagaccctgactccc
actgccaacggtcaggagatcagcagccagctggagctgctcgtctcccagctgctcgcc
ctgcagaactctgatgatctcatttcccagagggctttggcctcttgtcagggtgtcccc
gcgatccagcctgcttctccagccccccctccgtcccaggccccccccctctgtctgccc
atccagatcatgctgctgccgctcagcaagaggttcagataccacttctacggcaaccga
cagaccaacaccctcagcaagccagagtggtacctcactcaggttctgatgtggatcggg
aacagcaaaaccttcatggaggaacggatccaacctatcctggaccgagccggggccaca
accagtgccatggtggagctgtgtcggggcctcctctctctggtccaggagaaggtggcc
agcgatgcttcccggctgctgtacgacgacgcgctcttctgccacctggtggaggaggtg
ctgcagtttgagaaggagctgagaggaaaccactcgttccccgccgtgctgcccggcctg
ctgcacctcctgctggaagacgccatcctgcagaagtggctcactgtggagaagaagatg
gcggtggagaagatggacgccatgctgtcgtcagagggagcgtggagctctcagtacaaa
gacatcagtgatatggacgagctgaaggctcccgactgtgcagagaccttcatgaccctt
ctgcaggtcatcactgagcggtaccgctccctgccctgtccttctgcacagctcaagttt
ctggggctccagaaagagctggtggacgacttccgcatacgactcacacaggtgatgaag
gaggagtcccgctgccctctgggggctcgatactgtgccatccttaacgctgtgaactac
atttccaccatcctgggagactggggagacaacgtgttcttcctgcagctgcagcaggcg
gcggtgtccctcggggaggagggggtcctggggggtctgggggtgttggaggtgggtcgc
ctggcctctctggagggctctctgttcgagggtctgctggcgctgctggaccggctgaaa
ggagacatgatgggcagactgctggagtggaccatgagggagatcacagagaaggtccgc
ccgtacggccaggaccggtggttgtccctgccgccccagcaggaccagtccatgaccctg
tccagctcggcctgccccatgatgctttgtgtgagggaccggctgttgaacctccatcag
gtcctgagtttctctctgttccagctggcctggcagggcctggcggagcggctggacaac
gttctataccaggaagtggtgctgtctaatcacttcagtgaagggggggccgctcagctt
cagttcgacatgaccagaaacctatttcctctgtttggccactactgcaaaagacctgag
aacttctttaagcatgtcaaggaggcgtgcatcctgctgagtctcagtgtgggctctgcc
atcctgctgaggaacctcctgaaggagtcgatggaggaggaggcgggggggggggcggct
gcaggggaccctcccccagagtcggccctcaatgagctgggggtctactgtttggcccct
tgtgatgttttaattctcctcaacctcagagccttctggcccggacagtaa
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