KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117439310
Entry
117439310         CDS       T09629                                 
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
  KO
K14791  periodic tryptophan protein 1
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pgeo03009]
    117439310 (pwp1)
Ribosome biogenesis [BR:pgeo03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    117439310 (pwp1)
  Pre-60S particles
   Other pre-60S particles
    117439310 (pwp1)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_EIPR1 WD40_Gbeta WD40_RFWD3 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD_LRWD1 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_Aladin Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 117439310
NCBI-ProteinID: XP_033931090
LinkDB
Position
23:23897539..23910719
AA seq 496 aa
MSAQITCVGWVARGVSKETPDKVELSQEELARIISEARDEIGELAAEEEEDDDEGICEDN
LDGNTAEDVAAVPKKKNEDGKVDDDELAEYGLDRYDEEDAATSNLGDSLAGLTVYSCNEE
DPYITIKDTDQYEREDFQIKPSDNLIMTGRAEKDVCNLEIHVYNSDEDSLYVHHDILLPA
YPLCIEWLNFDPSPGEGAGNYAAVGNMTPQIDVWDLDVVDCLEPAFSLGTKKAAKKKKKG
KKGGAAAAEPLEGHTDAVLDLSWNKLLRTVLASGSADDTVVLWDLTQGKPATTLRRHTDK
VQTLSFHPFEAQTLISGSYDKTAVLYDCRSPDNSNRTWRFSGQVERLAWNHFSPYNFLAS
TEDGFIYCLDARSDKPLFTLKAHDAEVSGLDLSSQIKGCLVTSSADKHVKIWDILGNKPN
LVHSRDMKMGVLFCSSCCPDHPFVYAFGGQKEGLRVWDISDVAAVTEVFGGRERMVANTG
SQASSAAASGEMEVSE
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgagtgcgcagattacctgtgtcggatgggtagcgaggggcgtctccaaggaaaccccg
gacaaagttgagttgagccaagaagaacttgcccgcatcattagtgaagcaagggatgag
attggggaactagcagccgaggaagaggaagacgacgatgaaggcatttgtgaagataat
ctcgatggtaatacggcggaggacgttgctgccgtcccaaagaagaagaacgaggatgga
aaggtcgatgatgacgagctggcagagtacggcctggacagatacgatgaagaggatgca
gcgacctctaatctgggagacagtctggctgggctgacggtgtacagctgtaacgaggag
gatccctacatcaccatcaaagacacagaccagtacgagcgggaagacttccaaatcaaa
cccagtgacaatctgatcatgaccggccgggcggagaaggacgtctgcaatttagagatc
catgtttataactcggatgaggactctctgtatgtccatcacgatattctgctgccagcg
taccctctgtgcatcgagtggctcaactttgaccccagccccggagaaggtgccggtaac
tacgccgctgtggggaacatgaccccccagatcgatgtgtgggacctggatgttgtcgac
tgcttggagcccgccttctccctggggaccaagaaggcggccaagaagaaaaagaagggc
aagaaggggggggccgcagcagccgagcccttggagggccacacagacgcagtgctggat
ttgtcctggaacaaactgctcagaactgtgctggccagtgggtcggctgacgacaccgtg
gtgctgtgggatctcactcaaggcaaaccggccacgactctgcgcaggcacacggataag
gttcagacgttatcattccacccgttcgaggcccagactctgatatcaggctcttatgat
aagacggctgttctgtacgactgccggagtccagacaacagcaaccggacctggaggttc
agcgggcaggtggagcggctggcctggaaccacttctccccgtacaacttcctggccagc
acggaggatgggtttatctactgtctggacgcacgctcggacaaacccctgttcacactg
aaggctcacgatgcagaagtgtcgggtctggacctcagcagccagatcaaagggtgcctg
gtcacctcgtcagccgacaaacacgttaagatttgggacattttgggcaacaaacccaac
ctggtgcactcgagggatatgaaaatgggtgtgctgttctgttcgtcgtgttgccctgat
caccccttcgtctacgccttcggagggcagaaggaaggcttgagggtttgggatatcagc
gatgttgcagcagtgaccgaggtgtttggcggtcgagagcgcatggtggcgaacacgggg
tcccaggcttccagcgctgcagcctcgggagagatggaagtctccgagtga

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