Pseudochaenichthys georgianus (South Georgia icefish): 117439461
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Entry
117439461 CDS
T09629
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04510
Focal adhesion
pgeo04512
ECM-receptor interaction
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117439461 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117439461 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117439461 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_G_1
Laminin_B
Laminin_N
Laminin_G_2
Laminin_I
Laminin_II
Sfi1_C
Motif
Other DBs
NCBI-GeneID:
117439461
NCBI-ProteinID:
XP_033931236
LinkDB
All DBs
Position
24:29022070..29224389
Genome browser
AA seq
2897 aa
AA seq
DB search
MKRLRLVLLTALLWQCCHAQQRGLFPAVLNLASMADISTNATCGSTGPEMFCKLVEHVPG
QPIRNAQCRICNQKSTTPTEQHPIEYAIDGTNRWWQSPSIKNGRKYHSVTITLDLKQVFQ
IAYMIIKAANSPRPGNWILERSLDGVTFDPWQYYAMTDTECLTRFNINPRTGNPSYTRDD
EVICTSFYSKIQPLENGEIHASLINGRPSAEDPSQTLLNFTSARYIRLVFQRIRTLNADL
MTLTQRDPRELDPIVTRRYYYSIKDISVGGMCICYGHAKACPLNTDTKKFSCECEHNTCG
ESCDRCCPGYNQQAWMAGTFLTRHVCEKCNCHNKAEECYFNQTVADLSLSLNVQGQNRGG
GVCINCLDNTAGINCQTCAAGFYRPAEVNAEEEDPCIPCSCDSHGSISQSCVPDSSQATP
LQPAGSCRCKEGFGGLQCDRCAVGYMGYPSCQRCNCSVEGSSNADPCVTPCVCKENVEGG
NCDRCKLGFFNLQGHNPRGCDKCSCMGISSQCSSSTWSYHNETTLTGWHLLGEAGGRVWS
VHRQTPPYLSVRHSDVVNDLGSAYYWNAPELYLGNKISAYGGSLVYTVSYTTDQPEPMAI
RVTSQPDLIIEGGGIKIIDRRFGQPVYPSSPSTNHIPLSPANFLVAESAQPIGRRDFLSV
LANVTRVMVRASYSTETSAVYRLHSFSMEVANPSAGGERRAAAVESCSCLPGYAGTSCET
CVPGFRRVNGNLYSGVCEACRCHGHSTQCHEVTGHCLDCSHRTYGPHCDTCLPGYYGNAT
RGSPADCQSCACPLNLPSNNFSPTCHLGREGELLCDQCQPRYTGPRCDRCSNGFFGRPSE
PGGYCEPCDCHDNLDLSIPGSCDPITGQCLLCRQGYGGSSCDSCADGYHGDAITAKNCQP
CQCHTNGSVSEVCNKETGRCECKENVAGRQCDECIPNCWWDAELQDCVSCGCSPPGSMSQ
RCDVEGRCICRPGFVGRHCDLRRQGYERRETRRPVERVPLTAVHQRWGGSSRTGGCPRGA
YRPSTGPQTHGISTGGVCVPCHCNSFGSKSFDCDEAGQCRCQPGVSGPKCDRCSRGFFNF
QEGGCTPCQCSHVGNNCDTNTGQCICPPNTIGERCDHCAPNHWGHDITTGCKACGCSVVG
AVKQQCNMNTGCCMCRDAFRGEKCIECQIGYRDFPQCTQCECDVAGSDSETCDLERAVCA
CADRTGKCSCKANVEGHNCERCKSDTFGLSVRNPLGCSNCYCYGLTSSCSEAQGLIRMWL
ALRPEQTVLPLVDKANTVETRRGVTFQHPEIIAHTDMLTSTLSEPYYWKLPEQFRGSMIT
AYGGQLKYAVYFEAREETGPSSYEPQVIIKGGPNRNILMTRHIPGLQIGTLTRHQIDMTE
HEWKYADGRSMTREDFMDVLFYVEYILIKASHGNLMRHSRISELSLTVAEEGRPSKETLK
AHQIEKCDCPIGYSGFSCEECAAGFYRLRSGSTASAPASRVPTAAGMGSCVQCQCSGHSS
TCDPETSICQKCHDNTEGDRCERCAAGFYGVVRGFHDDCKPCACPLTNPENNFSPTCATE
GYDDYRCTACPEGYEGKYCERCSTGYHGNPRMPGGHCEECKCSVWGAQPGPCDPVTGQCQ
CRVGASGTSCDQCMDRHVCGDAGIISCDDECSGLLISDMDRLYRIITEVTLTSPLPPPYK
VLYRFENMTEELKHMLSPQKAPERLLQLADSNMGSLVVEMDQLHSRATKVSADGEQVEDD
ADRIHKRAEDLEQFIRDTLLGAGELQSKAAELNQTLSRNDGTPEKSLEEMKEEIQAMLDE
MRKRQLGGEKNIADEEMELAEELYQRVKRLFGDPHQATEDLKAEIKEKLSDHEGKLQEAQ
DLLHSAQGKTREAGSVSDQNKANLTSLERKSSAVNEVKQKAQEVLGEGERFLDEANQLSE
NINKEIEDLEEMGRELDPLHVKLDDRVNHLTTGLKGGGLANHVHDAEEHAKQLNESAAIL
DSILAEAKNLSFNATAAFKAYSNIKANVDAAERDAKAAKQSASEALALALDPEVPVKEAA
QRSLQKSHKLLNEAKQLQNDVKENEDGVSGLKGRVKAARDMAKDLLKAVNGTMAMLNSIP
NDTAVKLAATKAVAADANATAIDVLERLGDLNLQLHGLQSNYSDLEDTVKAANDMIQDPD
KNTIIHAAGAKVKDLEDEADRLLEKLQPIKKLQDNLRRNISQIKELINQARKQANSIKVS
VSSGGDCLRSYRPDIRKGRYNTIILHVKTTTPDNLLFYMGSAKYVDFLALEMRKGKVYFL
WDVGSGVGRVEYPHHTIHDGNWHRIEASRNGLNGTISVYPLEGSMAGMMPTPASANSPTT
FTILDVDQNAYLFVGGILGTVKKADAVRTNTFTGCMGETFLDGKPIGLWNYRERQGDCKG
CVVSPQQSDVEGTVQLDGEGYAAVGRPTRWNPNVSSVTFKFRTFSSESLLMYLATEDMKD
FMSLELSEGKVKVNFDLGSGVGSALSASRHNDGQWKSLTMSRNKKQATVTVVDIDSGAEE
KIVTTSQGAATGLNLKEHQKIYFGGMPTIGNYSMTARSEVTLKRYAGCLREIEVSRTPYS
LLSSSDYTGVTKGCNAENLYTVSFSKPGYMELGGLSLVVGTEISLSFSTLADTGTILLAV
GGASPVIKQARNSNLLSTKRRRRQSGEPYLSVMLNKGSLEVLMFTGSHSPRRVIRRAEQG
ALNDGREHSLRIERQPGRSFAVQVDEEAKREAALPNDQPVSLKRVFLGGIPAEVEQTSNR
ANIPFQGCIWNLMVNAVLSDFSLPVSFENAEIGQCPNIAPPPAPLPLPEEEEPEEEKEVS
KPLSPPLTPTPSPGLPAETTPPPAATPTAAAAPPTAKTEPSADLVYITYTHTHTHTHNIN
LSPFSLASSIYLVVFSI
NT seq
8694 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgactccggctcgtgcttctgaccgcgttactatggcaatgctgccatgcccag
cagagaggtctgttcccggctgtgttgaacttggcctccatggcagatatctccactaat
gcgacctgtggttccacgggtccggagatgttctgcaagctggtggaacatgtacccggc
cagcccataagaaacgctcagtgtcgaatctgcaaccaaaagagtacaacacccacagaa
caacatcccatagagtacgccatagatgggacaaaccgttggtggcaaagtccctctatc
aagaatggaagaaagtaccactctgtgacaatcactctggacttaaaacaggttttccag
atagcctatatgatcataaaggcagccaactccccgcgcccaggtaactggatcttagag
cgttcactagatggcgtcacctttgacccctggcagtactacgccatgacagacacggag
tgcctgacgaggttcaacatcaacccgcggaccggaaatccatcctacacccgagatgat
gaagttatctgcacgtctttttattcaaagatccaaccactggagaacggagagatccac
gcgtctttgatcaatggccggccgagtgcagaggacccctcccagaccctgctgaacttc
acctccgcccgctacatcaggctggtgtttcagcgaatcagaacgctgaacgccgacctc
atgactctgactcagcgtgacccgagggagctcgatcccatcgtgacgagaaggtactat
tattccattaaggacatctcagtgggagggatgtgtatctgttacggccacgccaaagct
tgtccgctcaacactgatactaagaagttcagctgtgagtgtgaacacaacacatgcggg
gaaagctgtgatcgttgttgccccggttacaaccagcaggcctggatggcgggaaccttc
ctgactcgacatgtctgcgaaaagtgtaactgccacaataaggcagaggagtgctacttt
aatcagacggtagcagacctgtcactcagcctgaatgtccaaggtcaaaacagagggggc
ggagtctgtatcaattgcctcgacaacacagctggaatcaactgtcagacatgtgctgca
ggattttacagacccgccgaggtgaacgctgaggaggaggacccctgcatcccctgctca
tgtgactcgcatggctctatcagccaatcatgtgtcccggattcaagccaggctacgcct
cttcagccagcagggtcatgccggtgtaaggagggttttgggggtctgcaatgtgacagg
tgtgctgtgggttatatgggctacccgtcctgccagcgctgtaactgcagtgtggaggga
agcagcaacgctgacccgtgtgtaacaccgtgtgtgtgcaaggagaacgtggagggagga
aactgtgaccgctgtaaactgggattcttcaacctgcaaggtcacaatccaagaggctgc
gacaaatgctcctgtatgggcatctccagccagtgctcgtcctccacatggtcctatcac
aacgagaccactctgacgggctggcacctgctcggagaagcaggaggaagagtgtggtcc
gttcacagacagacgcctccatacctcagcgtccgtcactcagacgttgtgaatgacctc
ggctcagcgtactactggaacgcacctgagctttacttgggaaacaagatttcagcgtat
ggggggagtttggtctacactgtgtcctatactacagaccaaccagagccaatggccatc
agagtcacctcccaacccgacctgatcatagagggaggcgggatcaagattattgacaga
aggttcggccaaccggtgtacccgtcatcgccaagcaccaatcacattcctctttcaccc
gctaacttcctggttgcagagagcgctcagccaatcggtcgcagggatttcttgtcagtg
ttggccaacgtgaccagagtgatggtgcgggcctcttatagcacggagacaagcgctgtg
tacagactccactcattctctatggaggtagccaatccctctgctggaggagagaggagg
gcggcggctgtggagagctgctcctgtcttcctggatatgctggaacttcctgtgagaca
tgcgttcctggtttccgaagggtgaacgggaatctgtatagcggtgtgtgtgaagcttgt
cgttgccacggacacagtacacaatgccatgaggtcacaggacactgcctggactgctcc
caccgcacctatggccctcactgtgacacctgtctacctggttactacggcaacgccacc
cgtgggtcacctgcggactgccagtcctgcgcctgcccgctcaatcttcctagtaacaat
ttcagccccacctgccatctcggcagagagggggagctgctgtgtgaccagtgccagccc
aggtacacaggaccacgctgtgacagatgttccaacggattcttcggccggccctctgag
cccgggggatactgtgagccctgcgattgccatgacaacctggacctgtccatccccggc
agctgcgatccgatcacaggccagtgtctgctctgtcgtcaaggttacggcggctcgtct
tgcgacagttgcgctgacggttaccacggagacgcgatcacagcgaaaaactgccaaccc
tgtcagtgtcacactaatggctctgtatctgaggtttgcaacaaggagactggacggtgc
gagtgcaaagaaaatgtggctggacgacagtgtgacgagtgcattcctaactgctggtgg
gacgctgagctgcaggactgtgtctcctgtggctgcagcccccccggttccatgtctcag
cgctgcgacgtcgagggccgctgcatctgtcggcccggctttgtgggccggcactgtgac
ctgcgtcgccaaggttatgagaggcgggagacccgaaggccggtggagcgcgttcccctc
acagccgtgcatcagagatgggggggctcctcccgcacgggggggtgtcccaggggggcg
tacaggccgagcacagggcctcagactcacggcatcagcaccggaggagtgtgcgtcccg
tgccactgtaactcgttcgggtccaagtcgttcgactgtgatgaagccggtcagtgtcgc
tgccagcccggcgtctccggacccaaatgtgaccgctgctctcgaggattcttcaacttc
caggagggcggctgcacaccttgtcagtgcagtcacgtggggaataactgcgacactaac
acggggcagtgcatctgtcctccaaacaccatcggagagcggtgcgaccactgcgccccc
aaccactggggccatgacatcaccaccgggtgcaaggcgtgcggctgcagcgtggtcggc
gcggtaaagcagcagtgcaacatgaacacaggctgctgcatgtgtcgagacgccttcaga
ggagagaagtgcattgaatgtcaaattggatacagagactttcctcagtgcacccagtgc
gagtgtgacgtcgccgggtcggacagcgagacctgcgacctggagagggccgtgtgcgcc
tgcgccgatcggacggggaagtgtagctgcaaggcaaatgtggaaggacacaactgtgag
cgctgtaagtccgacacgttcgggttgtcggttcgaaaccctctcggctgcagcaactgt
tactgttacggtctgaccagctcctgctcagaggctcaggggctcatcaggatgtggttg
gcgctgaggcccgagcagacggtgctccctctggtggataaagccaacaccgtggagacg
aggagaggagtgacgttccagcatccggagatcatcgctcacacagacatgctcacctca
actctctctgaaccgtactactggaaactacccgagcagttcagaggctccatgatcaca
gcatatggtggacagttgaaatacgctgtgtactttgaggccagggaggaaaccggccct
tcgtcctacgagcctcaggtcatcattaaaggcggtcctaaccgtaatatcctgatgaca
cggcacataccgggactgcagattggcacgctcacccgccaccagatcgacatgacagag
catgagtggaagtacgcagatggcaggtccatgactcgagaagacttcatggatgttttg
ttctatgtggaatatatcctcattaaggcttctcacggaaacttgatgagacacagccgt
atttcagaactcagtttgacggtggccgaggaaggcagaccaagcaaagagaccttgaaa
gcccatcagatagagaagtgtgattgtccaatcggatactccggattctcctgtgaggag
tgcgctgcaggtttttaccgtcttcgctccggctccacagcatctgctcctgcatccaga
gtgccaaccgctgccggcatgggcagctgtgttcaatgccaatgcagtgggcactcttcc
acctgtgaccctgagacatccatatgccagaagtgccacgacaacacagagggcgatcgg
tgtgagcgctgcgctgcgggtttctatggtgtggtccgaggtttccatgacgactgtaaa
ccctgcgcctgtcccctcactaacccagagaacaatttcagtccaacgtgtgcaacagag
ggatacgatgactacagatgtaccgcctgtccagagggatatgagggcaaatactgtgag
aggtgttctactggttaccatggtaacccgcggatgcccggcggccactgcgaggagtgt
aagtgttcggtgtggggtgcgcagcccggaccatgtgacccggtcactggccaatgccag
tgtagggtcggggcatcggggacgtcatgtgaccagtgcatggaccggcatgtgtgtgga
gacgctggcatcatctcatgtgatgatgagtgctcaggtctgttgatcagtgacatggac
cgcctgtaccgcatcatcactgaggtcaccctgacgtcacccctcccaccaccttataag
gtgttgtaccgcttcgagaacatgacggaggaactaaagcacatgctgtcacctcagaaa
gcgccggagagattactgcagctggccgactccaacatgggatcactggtggttgagatg
gatcagctacacagcagggccactaaggtgtctgctgacggagagcaggtggaggacgat
gcggacaggattcataaacgagctgaggacctggagcagttcatcagggacacactgctg
ggagctggagagctccagtccaaggctgccgagttgaaccaaactctctctcggaacgat
ggaactccagaaaaaagcctggaggagatgaaggaggagatccaggccatgctagacgag
atgagaaaacgacagctgggaggggagaagaacatcgccgacgaagagatggaactagca
gaggagctgtatcagagagtgaagagattatttggcgacccccatcaggccacagaagac
ctgaaagcagagataaaagagaagctctcagaccatgaggggaagctgcaggaggcccag
gatctgctccactctgcccagggaaagaccagggaggctggatcggtgtctgaccagaac
aaggctaacctcacatctctggagaggaagagctctgcagtgaacgaggtgaaacagaaa
gcacaggaagtcctaggagaaggagaacgttttctggatgaggctaaccaactttctgaa
aacatcaacaaggagatagaggatttggaggagatgggcagagagctggatcctcttcat
gtgaagctggacgatagagtcaatcacctcaccactggtttgaaaggcggcggcctggcc
aatcacgtgcacgatgcagaggaacacgccaagcagctgaacgaatctgctgccattttg
gatagtattttagcagaagctaaaaacctctccttcaacgcaacagctgccttcaaggcc
tatagcaacattaaagcaaacgttgatgcagcggagagagatgcgaaggcagccaaacag
agtgccagtgaggctctggctctggctttagatccagaggtcccagtgaaggaagccgct
cagcgatccctgcagaagagccacaagctgctgaacgaagccaaacaacttcaaaatgat
gtcaaagagaatgaagatggcgtgtccgggctgaagggcagagtcaaagcagcgagagac
atggccaaagaccttctgaaagctgtcaacggaaccatggcaatgctcaactctatcccc
aatgacacagcagttaagctagcagccacaaaggctgtagcagcagatgctaacgccacc
gccatcgacgtcctggagcgcctcggggatttgaacctgcagctccacggcctccagagt
aactacagcgacctggaggacaccgtgaaagcagccaatgacatgatccaggacccggat
aaaaacaccatcatccacgctgcaggagctaaagtgaaggacttagaggatgaagctgat
aggctgttggagaagctgcagccaatcaaaaagctgcaggacaacttgaggcgtaacatc
tctcaaatcaaagaactgatcaaccaagccaggaaacaagctaactcgatcaaagtgtca
gtgtcatcaggtggtgactgtctccgtagttaccgccctgatatcaggaaagggaggtac
aacaccatcatcctccacgttaaaaccaccacacccgacaacctgctcttctacatggga
tcagccaaatatgttgatttcctcgccttggagatgcgtaaggggaaggtgtatttcctt
tgggacgtgggttcgggtgtggggagggtcgaatatccccatcacaccatccacgatggg
aactggcacagaatagaggcgtctcgtaatgggttgaatggcaccatatcagtttatcct
ctcgagggctccatggcgggtatgatgccgacccccgccagcgccaactcgcccacgacc
ttcaccatcctggacgtggaccagaacgcctacctgtttgtcggagggatactcggcacc
gtcaagaaagcggacgcagtgagaacaaacaccttcacaggctgcatgggggagaccttc
ctcgacgggaaacctattggactgtggaactacagagagagacaaggagactgtaaagga
tgtgtcgtcagcccccagcagtcggatgtggaggggacggtgcagctggacggcgagggc
tacgccgcggtgggacgtcccaccaggtggaacccaaatgtttccagcgtcacctttaag
ttccgcacattttcctccgaatccctgctcatgtatctggctactgaagatatgaaggac
ttcatgtctctggagctgtccgaggggaaggtgaaggtgaactttgacctcggctcagga
gtcggcagcgccctctcagccagccggcacaacgacggacagtggaagtccctcaccatg
tcacggaacaagaaacaagccacggtgaccgtagtggacatcgacagcggtgctgaggag
aaaatagtgacgacgtctcagggcgcggcgacaggtctgaacctcaaagaacaccagaag
atctactttggagggatgcctaccattggaaactatagcatgacagccaggtcagaggtc
actctgaagcggtatgctggctgtcttcgggagattgaagtctccaggactccgtacagt
ctcctcagcagctcagattataccggggtcaccaaaggatgtaatgcagagaacctgtac
acggtcagcttctctaagccgggctacatggagctgggcggcctgtcgctggtggtcggc
acggagatcagcctgtcgttcagcactctggccgacactgggaccatcctgctggctgtg
ggcggggcttcacctgtcatcaagcaggcccgcaactcaaacctcctcagcaccaagagg
agacgcagacagtctggagagccctacctctcagtcatgctgaacaaaggctctctggag
gtgttgatgtttaccggcagccacagtccgcgtcgtgtcatcagacgagccgagcaaggc
gcactgaacgatggcagagagcactcgctgcgcatcgagaggcagcctggcagatctttt
gcagttcaggtggacgaggaggccaagagggaggcagcgctccccaacgaccagcctgtg
agcctgaagcgcgtcttcctcggtggtattcctgcagaagtagagcagacgtccaacaga
gccaacatcccattccagggatgcatatggaacctcatggtcaacgcggttctctcagat
ttctccctgcctgtgtcctttgagaacgctgaaatcggacagtgccccaacatcgcccct
ccgccagctcctctcccactgcctgaggaagaggagcccgaggaggaaaaggaggtgtcg
aagcctctcagtcctcctttgaccccgacaccatccccaggtcttcctgctgagaccacg
ccccctcctgctgccacgcccactgctgctgcagccccgcccaccgccaaaacggagccc
agtgctgacttggtatacattacatacacacacacacacacacacacacacaacatcaac
cttagccctttttcacttgcttcctccatttaccttgttgtcttttcaatctaa
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integrated database retrieval system
