Pseudochaenichthys georgianus (South Georgia icefish): 117439497
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Entry
117439497 CDS
T09629
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117439497 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117439497 (lft1)
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Transforming growth factors (RSTK binding)
117439497 (lft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Tropomodulin
Motif
Other DBs
NCBI-GeneID:
117439497
NCBI-ProteinID:
XP_033931284
LinkDB
All DBs
Position
24:complement(8945221..8947113)
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AA seq
358 aa
AA seq
DB search
MDFLRACVLCTALFGLSKAFTHQDMKDALLQKLGLDEVPKIHKRDLENLVIPAHIRNKYT
TMLKMHHSRRRRSLPSLAGILRGIPGNADISGEYVYSDTTRQSIVFDMESRIPDNSEVTM
AELKLYQRASYHKRFAVERKNHRPVNNARVSIYWVEVLPNGSNRTSLVDSRLIPIHETGW
KSFDVTQAVHYWSKMQQKTPMYLEVWIEGERPGSYAAEMAKSVRFTTQEQTDNTLGKPEL
ILYTLNLEEYGSRGDCDMNQNKDSCCRDKYFINFRALTWTQYWIIEPAGYQAFRCTGGCK
QPKRNYGYGERRCTASDSAPLPIMYLVKKGDYTEIEVAEFPNMIVEKCACAMDNVSVV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctccgcgcttgtgttctttgcaccgctctcttcgggctctccaaggctttt
acgcaccaggatatgaaggacgcgctgctgcagaaacttggcttggatgaagttcctaaa
atccataaaagggatttggagaatctggttattccggcgcatatcagaaataagtacacg
actatgctgaagatgcaccacagcagaagacgcagatctctgcccagcctggctggcatc
ctgaggggaatccctggcaatgctgatatttctggggagtatgtgtattctgacaccact
cggcaaagcattgtgttcgacatggagtcgaggattccggataacagcgaggtgaccatg
gctgagctgaagctctaccagcgtgcctcttaccataaacgcttcgcggtggagaggaag
aaccaccggcccgtcaacaacgcccgggtcagcatctactgggtggaggtgctgcccaac
ggatccaaccggacgtcgctggtagactcacggttgatccccattcacgagacaggctgg
aagagctttgatgtgacgcaggcggtgcactattggtccaagatgcaacagaaaacacct
atgtacctggaggtgtggatcgagggcgagagacctggcagctacgcggcagagatggcc
aagagtgtgcgctttaccacccaggagcagacggacaacaccttggggaagcccgagctc
atcctctacacactgaacctcgaagaatacggttctcgcggtgactgcgacatgaaccaa
aacaaagactcctgctgcagggataagtacttcatcaacttccgcgccctcacctggacg
cagtactggatcatcgagccggcgggttaccaagccttcaggtgcaccgggggctgcaaa
caacccaaacgcaactacggctacggggagaggcggtgcacagcgtcagatagcgccccg
ttacccatcatgtacctggtgaagaagggtgactacactgagatagaagtggccgagttc
cccaacatgatcgtggagaagtgtgcttgcgccatggacaatgtctccgtagtatga
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