Pseudochaenichthys georgianus (South Georgia icefish): 117439575
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Entry
117439575 CDS
T09629
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117439575 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117439575 (abcb10)
Transporters [BR:
pgeo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117439575 (abcb10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
AAA_29
AAA
DUF87
AAA_25
RsgA_GTPase
AAA_5
Zeta_toxin
AAA_33
nSTAND1
AAA_30
AAA_14
AAA_24
P-loop_TraG
AAA_18
Motif
Other DBs
NCBI-GeneID:
117439575
NCBI-ProteinID:
XP_033931413
LinkDB
All DBs
Position
3:42126406..42140669
Genome browser
AA seq
716 aa
AA seq
DB search
MRLLNRMSRYSHGVSKFKLTQPRMLWLDHRLTLSAAPRRKRQFTGVKSSAHPAFPLCSPG
LFVSVLPCSPLRGLSILCPHTRTVTHTHVAFASSSAASTPTPAGQVKTQADTEGEQTSTT
VPLEDVKRILKLAHPERWKLAAALGFLTVSSGVTMSAPFLLGKVIDTIYTAGADTETMTA
SLTSLCIMMTGVFLCGGAANAARVYLMQTSGQQIVRNLRASLFSSILRQEVAFFDRNRTG
ELINRLSADTAVVGRSITDNLSDGLRAVAQAAAGVSMMFYVSPSLASFVLLIVPPLAALA
VVYGRYLRSISKSTQDALAQATELAEERISNMRTVRAFGKELSEVNTYTEKTDQVLKLAR
KEAVLRAGFFGVTGLSGNIMILSVLYKGGLLMASQHMTVGELSAFLMYTFWVGISIAGLS
SFYSELMKGFGAGSRLWELLDRKPEFPLNEGLMLSADQLKGRLEFSEVSFAYPTRTEAPI
FQDLSLLVPAGTVMAVVGPSGSGKSTLVSLLLRLYDCNSGTITIDGHDIRDLNPYWLRSH
IGTVSQEPVLFSYSIRDNIAYGAVDPEAVTTEQIYGAARAANAFNFIQDFPNGFNTVVGE
KGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMTGRTVVIIA
HRLSTIQNANAVAVLDQRRIAECGQHTELLGNRQGLFRKLMEKQAFLQVKQKRALR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttttaaaccgcatgtcaaggtactctcatggagtatccaaattcaagctaaca
cagccgaggatgttgtggctggatcaccggctaactctctcagccgccccccggaggaag
aggcagtttaccggggtcaagtcctcagcccacccggccttccctctctgctccccgggg
ctcttcgtgtccgtcctgccctgcagtcccctcagaggtctctccattctctgtccacac
acacggacagtcacacacacacatgttgcctttgccagctcttcggccgcctccacaccg
acaccagccggacaagtgaagacccaggcggacacagagggcgaacagacctccaccacg
gtccctctggaggatgtgaaaaggattttgaaactagctcacccggagagatggaaactg
gcagctgctcttggcttcctgactgtgtccagtggcgttaccatgtcagccccattcctc
ctgggtaaagtgattgacaccatttatactgctggagcagacacagagacaatgaccgcc
tccctcacatcattatgtatcatgatgacgggggtgttcctctgtggaggggctgccaac
gctgccagagtctacctcatgcagacatcaggccaacagattgttcgtaatctccgtgcc
tccctcttctcctccatcctcagacaggaagtggctttttttgacaggaataggaccgga
gagcttatcaaccgcctctctgctgacacggccgtggtgggccgctccatcacagacaac
ctgtccgacgggctgagagccgtcgcccaggccgccgctggagtcagtatgatgttttat
gtctctcccagtcttgcaagtttcgtgttgctgattgttcctcctctggctgctcttgct
gtggtttatggcagataccttcgctccatctccaaaagcacacaggacgcactcgcacaa
gccacagagttggcagaggagcgtatcagcaacatgcggacagtcagggcttttggcaaa
gagctgtctgaggtcaacacatacacagagaagacagaccaggtcctcaagctggccagg
aaggaagctgtgctgcgggctggcttctttggagtgaccgggctcagtgggaacatcatg
atcctgtcagtgctctacaagggaggcctgctgatggccagccagcacatgactgtgggg
gagctgtcagccttcctcatgtacaccttctgggtgggcatcagtattgcaggtctgagt
tccttctactctgagctgatgaaaggattcggagcaggatctagactgtgggagctgctg
gaccgaaaaccagagtttcctcttaatgagggtctcatgctctctgcagaccagctgaaa
gggcggttggagttctctgaggtctcctttgcctacccgacccgcactgaggcccctatc
ttccaggacctcagcctgctggtccccgcgggcaccgtcatggccgtggtgggacccagc
ggctcggggaaatccaccctggtgtccctgctgctccggctgtacgactgcaactctggt
actataacaatcgatggtcacgacatcagagatctgaatccctattggctcaggagtcac
attggaactgtcagccaggagcccgtgctgttttcctactctataagagataatatagct
tacggtgcagtggacccagaagctgtgaccacagagcaaatctacggggcagcaagagcc
gccaacgccttcaacttcatccaggatttccccaacggcttcaacactgtggtgggggag
aagggggtgctgctgtcaggtggtcagaagcagaggatagccatagccagggctctgctc
aaaaatcctaagatcctgctgttagatgaggctaccagtgcattggatgctgagaatgag
ttcctggtccaggaggcgttggagcgtctgatgacagggaggacggtcgtgatcatcgct
caccgtctgtccaccatccagaacgctaacgccgtggctgttctggaccagcggcgtatc
gcagagtgtggccagcacacagagctgctaggcaacaggcaaggactgttcagaaagctg
atggagaagcaggcgtttctacaggtgaagcagaaacgtgccctccgctga
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