Pseudochaenichthys georgianus (South Georgia icefish): 117439677
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Entry
117439677 CDS
T09629
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117439677 (bbs1)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
BBSome
117439677 (bbs1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAE_BBS1
BBS1
PHTB1_N
BBS2_Mid
PQQ_2
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
117439677
NCBI-ProteinID:
XP_033931552
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All DBs
Position
24:complement(34113822..34129819)
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AA seq
399 aa
AA seq
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MLFTVITCIGTLKKSTADEDGVSCLVIGTESCDVFVLDPEAFIILSTMSLPAPPTMMDVT
GQFDVEFRITVACRNGNIYILRRESEKPKYCIELSSHPVGLVRVGKNVVVGCADESLQGF
TQKGKKLWTVLLPAPITTMASMELPARGLQAVLVGLANCEVQLYRDKSLLSSIKTPEVVS
SICFGRYGREDGTLIMTTKDGGLIVNILKRTASFEDRAAAAGPPLAQSVRLNVPKKTKLY
VDQTLRERESGAAMHRAFQMDLSRLRLAAAGAYVKALESSLTPMSCRLSEPLKMNAVVQG
LGPAFKLTLNVQNTAACRPVANLAVSFLYDESLYRMRTPYMRIPLLVPGVVYPVETFVEC
SSDKGISDIIKVFVLQEGSSAPLLSAHINMPVSEGLTIN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttaccgtcatcacctgcatcgggacgctgaagaagagcacggccgacgaagat
ggcgtcagctgtttggtgatcggcacggagagctgcgacgtcttcgtgctcgaccccgag
gccttcatcatcctctccacaatgtcgctgcccgccccccccaccatgatggatgttacc
gggcagtttgacgttgagtttcgcatcacggtggcgtgtcgcaacggaaacatctacatc
ctgcgcagggagtcggagaaaccgaagtactgcatcgagctgtcgagccacccggtgggt
ctggtgcgggtcgggaagaacgtggtggtgggctgcgccgacgagagcctgcaggggttc
acccagaaggggaagaagctgtggaccgtcctcctcccggctcccatcaccaccatggcc
tccatggagctcccggcccggggtctgcaggcggttctggtgggtctggctaactgtgag
gtccagctgtaccgagacaagagcctgctgagcagcatcaagacccccgaggtggtctcc
agcatctgcttcggccgctacgggcgcgaggacgggacgctcatcatgaccaccaaggac
ggcggtctgatcgtgaacatcctgaagaggacggcttccttcgaggaccgcgcggccgcg
gccgggccgccgctggctcagagcgtccggctcaacgtgcccaagaagaccaagctgtac
gtggaccagacgctgcgggagcgagagagcggcgccgccatgcaccgggccttccagatg
gacctgagccgcctgcgcctggccgccgccggcgcatacgtcaaggctctggagtccagc
ctgactccgatgtcctgccgcctcagcgagcctctgaagatgaacgccgtggtgcagggc
ctcggtccggccttcaaactcacgctgaacgtccagaacacggcggcgtgtcgacccgtc
gccaacctggccgtcagcttcctgtacgacgagagtctgtaccgcatgcggacgccgtac
atgaggatcccgctgctggtgcccggcgtcgtttaccccgtggaaaccttcgtggagtgc
agcagcgacaagggcatctctgacatcatcaaagtgttcgtgctgcaggagggcagcagc
gcgcccctgctcagcgcgcacatcaacatgcctgtgagcgaggggctgactatcaactga
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