Pseudochaenichthys georgianus (South Georgia icefish): 117439708
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Entry
117439708 CDS
T09629
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117439708 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117439708 (lrfn5b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
Ig_2
LRR_9
Sp38
fn3
LRR_14
DHU1_N
LRR_EndoS
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
117439708
NCBI-ProteinID:
XP_033931601
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Position
24:complement(14680546..14692160)
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AA seq
794 aa
AA seq
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MESLLVYLIVLGVGVKAHKVQVCPKRCVCQVLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSVKRKDFANMTRLVDLTLSRNTIGSIAPLAFKDLENLRALHLDSNRLSHIIND
TFSGMSKLHHLNLNNNQLANIHTGAFNDLTALEELDLSYNNLESAPWVAIQRMSNLHTLN
LDHNMLGYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPIFQRAGVLATSGIMGPTSFALSF
GGNPLRCNCELLWLRRLRREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVTMRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHSDGTLDILISTVKDSGSFTC
VASNPAGEAQQTVDLVIAKLPHITNNTVAEQEPDPGSSDIATVTKTGVEAGGLPLGNAKT
SQEKKVVIAEATSTSAMVKFNFQRSIPGIRMFQIQYNGTYDDSLVYRMIPPTSKSITVNN
LAAGTHYDLCVLAIYDDQVTSLTATRVIGCIHFTTEPQYLRCHFMQSQFLGGTIVVIIGG
IIVASVLAFIIFLIVRYRVCNQGDTDKALEMGDIRSLSSDGQLQGCGVPKSLSKPVLRPE
KNDKECLRISLPPPEPAKQKQPAVEASTKATMPDCTVSNSAATHSWHPASPGAPRPKRST
APPKPSEARRADVELDNMNRNNSSEVQMNTAVALAFPGQTNKWTAAPRGPRPQPAPRHYM
TVPAGGVRVNRRHSLNADSYVEHCYVAYPKPGASLRSKRSLSMSVELPQLDGSTNIHRAR
DKLSKSEWLLESTL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggagtccctcctggtttacctgatagtcctcggtgtgggcgtgaaggcccacaaagtc
caggtctgccccaaacgttgtgtctgccaggtcctcaaccccaacttggcaactttgtgc
gacaaaaagggtcttctgtttgtgcccccgaacatcgacaggcacacggtggagatgcgt
cttggggataactttgtaaccagcgtcaaacgcaaagactttgccaacatgacaaggctg
gtggacctgaccttgtctcgaaacactatcggctccatcgcacccctcgctttcaaggac
ctggagaacctgcgagcccttcacctggatagcaaccgtctgtcccacatcatcaacgac
accttcagcggcatgtccaagctgcaccacctcaacctcaacaacaaccagctcgcaaac
atacacaccggggccttcaatgatctgacagcgctggaagagctggacttatcctacaac
aacttggaaagtgcgccgtgggtggccattcagaggatgtccaatctccatacgctcaat
ttggaccataacatgctcggttacatcccagagggcaccttctcggggctgcagaagctc
aagaggctggatgtgacttccaacaagctccagaagcttccccctgaccctatcttccaa
agagccggggtcctggccacctctgggataatggggcccacgtcgtttgcgttgagcttt
ggagggaacccgctgaggtgtaactgtgagcttctctggctgcggaggttgcggagggag
gatgatctggagacctgtgcctcaccgcaacacctcgccgggcgctatttctggactgtc
tcagaggaagagttcctgtgtgagcctcctctcatcaccaggcactctcaggagctgcgc
gcgttggagggtcagagtgtgacaatgcgctgtaaggccaggggggatcccgaccccatt
atccactggatcgcccctgatggacgcctgatgtccaattcctccagggccgcggtccac
tcagacggcacgttggacatcctcatcagcacggtcaaggactccggttccttcacctgc
gtggcctccaacccggcaggtgaagcccagcagacggtggatcttgtcattgccaaactc
cctcatatcaccaacaacacagtcgcagagcaggagcccgaccccgggtcatcagatatc
gccacagtgacaaaaacgggggtagaggctggaggtttgcctctggggaacgcgaagacg
agccaggagaagaaagtagtgatcgctgaggccacgtccacctcggccatggtcaagttt
aacttccagaggagtattcctggaatacgcatgttccagatccagtataatggcacctat
gatgattcactggtttacagaatgatacccccgaccagtaagagcatcacggttaacaac
ctggcggcgggaacgcactacgacctgtgtgtgctggccatttacgatgaccaggtgacc
tcgctgacggccaccagggtgatcgggtgtatccacttcaccacagagccgcagtacctg
agatgccacttcatgcagtcccagtttcttggcggcaccattgtggttatcattggaggg
ataattgtggcctcagtgctcgcctttatcatcttcctcattgtgcgctacagggtgtgt
aaccaaggagatacagataaggctctagagatgggggatattcgctcactgagcagtgat
gggcagctgcagggctgtggggttcctaagtccctctccaagccggtcctgcgtcccgag
aagaacgacaaggagtgcctccggatctccctgccgcctccggagccagccaagcagaaa
cagcccgccgttgaagcctccaccaaagccaccatgccagactgcactgtctccaactct
gctgccactcacagctggcacccggcctcccctggcgctccccggcccaaacgctccacc
gctccacccaaaccctcagaggctcgccgggctgatgtggagcttgataacatgaaccgg
aataactcgtcagaggttcaaatgaacaccgccgtcgcactggcttttcctggccagacc
aacaaatggaccgcagcacccaggggtccgcggccccagccagcgcctcgacattacatg
actgtacccgcagggggagtgagggtgaaccgcaggcactccctgaacgctgactcatat
gtggagcactgttatgtggcttaccccaaacccggggccagcctgcgctccaagagaagc
ctgtcgatgagcgtggagctgccgcagctggacggctccacgaacattcaccgggccagg
gacaagctctccaagtctgagtggcttctggagagcactttatga
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