Pseudochaenichthys georgianus (South Georgia icefish): 117439881
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Entry
117439881 CDS
T09629
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a isoform X1
KO
K24720
tubby-related protein 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117439881 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Other domain-containing proteins
Tubby family proteins
117439881 (tulp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
117439881
NCBI-ProteinID:
XP_033931895
LinkDB
All DBs
Position
24:complement(24244673..24276290)
Genome browser
AA seq
1817 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRKRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRPTPQRVNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYSPL
QMHSHKPLLTVSFTSGDISLMNNYDDLSPTLIRTGLKDVVVQWCSQGDLLAVAGMERALL
PSDHSCPPTRSALVKFYNVQGEHIYTLDTPAQRPITTLCWGHRDSRLFLACGPALYVVRV
EHRVANLQLLCQQGIATAVKEEKDIAKLTMPSRLCFYVTTAFVPTIKPPIPDPNNMRDFV
SYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDPK
TDGKTDEIYGNSLISAMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRDLVCPF
SNRINIDPRKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQQNYLAQVTS
NIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFSSN
VFSEDEDDLPVSGPAGSTDDNPPCTVNIPIAPIHSPAQAMSPAQSIGLVQSLLANQNVQL
DVLTNPTATPAGATAGGSDQSQDTLLTAQYTVPTRYSSPGQVIFGGLEIGRLMVGPPPSH
HPSQPQQQSSHHPQQQHQQQQQQQQQQQQQKQQHIQPHHQQQQQHSLQQQQQHQLQQQQQ
LQQQQQQMLQHQHLQQQQQLQQQHIQQQLQHIQQQHQHQLQQQIQQQQHIQQQHQHIQQQ
LQQQMHHQHQTQHQMQQHQQQQQQQQHQQQQQHQQQHHHPLQQPLQIQIPVTSMSSGQTS
GAAMLQQGALQIQSPHPPADLVVERALGVEHEHLLKIKSMRQTQQLAEGDTLVFSAPLEL
SKMNPPPPYPGTVAAAVAAAAAAAASASAAASSLASGSVGGPSGTPPPGELSLKKGEFSL
YPSGQQQAQYPTPLGYERITTFDSSGNVEEVCRPRTRLVCNQNVYTLQGPGSSATLRVTS
SSADKKNQLPYASATLNRLTAPRYSIPSGDPPPYPDPANQNSAVGRNPGQRLDSSLIHAT
LRRNSREAALKVSQMLEAPRPLPPKAKNSSSSALAASFQQRVPTALYTCSQCSSGSSVGS
TAPGSTNGIAGGTIIRQDFPPGNGAPHSTVIVHSNSTTSLASQSSYSLLSALEGSGITGG
GSNRDRADYVNSAFSEDETLNQSLRNLALGGNDASGLVVKRPPPYQWDPAATEEVWVPQE
RTATLSPAGPPGPHKPPPLILSPAQHLDVSRLPFVLSPKSPTSPSAASFQAAAAAAGYQI
SLQYPPSSAYPGAQLQPIQGSPRPCSSPKELVAPVPFSQQDATLVLPPGYHANLANLTCC
PLPPLYPGGSSCAGLPIPSIALHTPWGTYNSCPPMSSPAVPLPPKASHMAVDKNVLSPPP
PPPPPPPPPVELQEAMADAGEGFQEVLSLTESPVPQRSDKFVKKNRKRVDGRTEEANVPP
LVEGSKSKKESRALGDFNSLISSPRLGGRDKKKLKGQKEQQLKAKKLSKGTANSEFQDSS
ESEPELFISGDELLNQCQSGKKGWKSKRNLRAANELDEIKCRKANEKEDRGLGSQGFVYV
MANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFS
AVQAFAVALANVTQRLK
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagccgtagagcatggcccggtcctctgcagcgactccaacatcctgtgcctg
tcctggaagggccgggtgccgaagagcgagaaggagaagccggtgtgcaggaagcgttac
tacgaggagggctggctcgctaccgggaacggtcgaggagtggtcggggtcacgtttacg
tccagccactgcagacgggaccggcccaccccgcagagagtcaacttcaacctcagagga
cacaacagcgaggtggtcttggtgcggtggaatgaacccttccagaaactcgctacctgt
gacacagatggaggaatctttgtctggatccagtatgagggccgctggtccgtggagttg
gtcaatgaccgtggagcccaggtgagtgacttcacctggtcccatgatggcactcaggct
ctcatctcctaccgcgatggctttgtcctggtggggtcagtcagcgggcagagacactgg
tcctccgagatcaacctggaaagccagattacctgtgggatctggacccccgatgaccag
caggtgttgttcggtactgcagatggacaggtgatagtgatggactgccacgggcgcatg
ctggcccacattctgctgcatgagtcggatggcatcgtcagcatgtcctggaactatccc
agtttcctggtggaggacagcagtgagagcgacacagattctgacgactactctccactg
caaatgcacagtcataaaccactgctgaccgtcagcttcacatctggagacatcagcctg
atgaacaactacgacgacctctctcccaccctcatccgcaccgggctgaaagatgtggtg
gtgcagtggtgctcgcagggggacctccttgcggtggccgggatggagagggccctcctc
ccctccgaccactcctgtccccctaccaggagcgcccttgttaagttctacaacgttcag
ggtgaacacatctacacactggacacaccagcacagcgccccatcactacgctgtgttgg
ggacaccgggactcccgtctgttcttggcatgcggcccggcgctctacgtagtgcgagtg
gagcaccgcgttgccaatctacagctactctgccagcagggcatcgccacagcagtgaag
gaggaaaaagatattgccaagctcaccatgccttcccgcctctgtttttacgtcactact
gcttttgtacccaccattaagccccccatccctgatccgaacaacatgcgtgattttgtg
agctacccgacagctggaaatgagcgtctgcactgtacaatgaagcgaacagaggataac
cctgaggtgggggggccctgctacactctgtacctggagtacctcgggggtctggtgccc
atcctaaaaggccggcgaataagtaaactgcgtccagagtttgtcatcatggaccctaag
acagatgggaaaacagacgagatatacggcaacagtctgatatctgccatgattgacagc
tgtaactgctctgactccagtgacattgagctgagtgacgactgggttggcaagaaatct
ccaaagatatccagagggagcaaatcccccaaactgcccagagacttagtttgtcccttt
tccaacaggatcaacattgatcccagaaaatcccccaaactttcccgtgctacacaagag
atctctaggtcaccacggttacccatacggaaaccctcaattgggtcacccagtctaaca
cggagggaatttcctttagatgacatcactcagcaaaattaccttgctcaggtcacatcc
aatatttggggaacaaaattcaagattgtggggcttgccgctttcttgccaactaatctt
ggtgcagtcatctataagacaagcctcctccatctgcagccccgacagatgaccatctac
ctgccagaggtgcgtaagatctccatggactacatcaatctgcccgtcttcagctccaac
gtcttcagtgaggatgaagatgacctgcctgtgtccggccccgctgggagcaccgatgac
aacccgccctgcaccgtcaacatccctattgcccccatccatagtccagcccaggccatg
tcccctgcccaaagcattggtctggtccaatcactcctagccaatcaaaatgttcagctg
gatgtcctaacgaatcccaccgcaacccctgctggggccacagctggtgggtcagaccaa
agccaagacaccctcctgacagcccagtacaccgtgcccaccaggtactccagccccggg
caggtcatctttgggggactagaaatcggacgcctgatggtgggacctccaccttctcat
catccttcacaaccacaacaacaatcaagccaccatccacagcagcagcaccaacaacaa
caacaacaacagcaacaacaacaacaacaaaaacaacaacacattcagccccaccaccaa
caacagcagcagcactcactccaacagcagcagcagcatcagctccaacaacagcagcaa
ctccaacagcagcagcagcagatgcttcagcaccaacacttacagcagcagcagcagctt
cagcagcagcacattcagcagcagctccaacacattcagcagcagcatcaacatcagctc
cagcagcaaatacaacaacagcaacacattcaacagcagcatcaacacattcagcagcaa
ctgcagcaacaaatgcaccaccaacatcaaacgcagcatcagatgcaacaacatcagcag
cagcagcagcagcagcagcaccagcagcagcagcagcaccagcagcagcaccatcatcca
cttcagcagcctctccaaattcagatccctgttacctccatgtcatccggacagacttca
ggtgcagcgatgctccagcagggggcgctgcagatacagagccctcatccacctgctgat
ttagtggttgagagagcattgggggttgaacacgagcacctcctgaaaatcaaaagcatg
cggcaaactcaacagctggctgaaggcgatacattggtgtttagtgcccctctggagctc
agtaagatgaaccccccgcccccctaccccgggacagtggctgccgctgtagcagctgca
gcagctgctgccgcctcagcatccgctgcagcctccagtcttgcatctggatcagtaggg
ggccccagtgggactcctccccctggagaactgtcactaaagaagggcgagttctcactt
tatccttcaggtcagcaacaagctcagtaccccacacccctgggatatgagaggataaca
acatttgacagcagtggcaatgtggaggaagtatgtcgtcctcgaacacgccttgtctgc
aatcagaatgtgtacacactccagggacctggcagctccgccactctcagggtcacctcc
tcctcagctgacaagaagaaccagcttccctacgcctctgccacactcaacagactcacc
gcacctcgctattccatacccagcggagacccgcccccgtaccctgacccggctaatcag
aatagtgctgttggcaggaaccctggtcagaggcttgacagcagtttgatccacgccact
ctcaggaggaacagccgagaggccgctctcaaagtctctcagatgctggaggcgcccaga
ccactgcctccgaaggctaagaacagtagtagtagtgcactagcagcctccttccagcag
agggtgccaacagccttatacacgtgcagtcagtgtagcagtggatctagtgtcggaagc
actgccccagggagcactaatggaatagctggaggaactataatcaggcaggatttccct
ccgggcaacggggcaccacacagcacagtcattgttcactccaacagcaccacttctctg
gcctcgcagtcctcttacagcctgctgagcgctcttgaaggatctgggatcacaggagga
ggaagtaacagagacagggcagattatgtgaattcagcatttagtgaggatgaaacgctg
aaccagtcattgaggaatctggcgctaggaggaaatgatgcatcaggactagttgtgaaa
cgcccacctccctatcagtgggacccagcagccacagaggaggtgtgggttcctcaggaa
cggacagccaccctgagtcctgctggaccccccggaccccacaaaccacctccacttatt
cttagccctgctcagcacttagatgtgtccaggctgccttttgtcctttctccaaagtcc
cccaccagtccaagtgctgcttcatttcaagctgctgcagcagccgcaggataccaaatc
tctctccagtaccctccatcctctgcctatcctggggcccagctacagcccatccaaggg
tctccacgcccctgctcctccccaaaggagcttgttgcaccagtacccttctcacagcag
gatgcaacccttgtcttaccgcctggttaccatgcaaacctggcaaacctcacctgctgc
cctcttccacccctgtatccaggaggaagttcttgtgccggcctccctattccctccatt
gccctccacactccttggggtacatataactcttgccctcctatgtccagtcctgcagtg
ccactaccacccaaagcttcccacatggcagtagacaaaaatgtcctttcgcctcctcct
ccacccccaccccctccacctccaccagtagagctgcaggaggccatggcagacgccggg
gaaggcttccaggaggtgctctccttgaccgagagccctgtcccacagcggtctgataag
ttcgtaaagaaaaaccgcaagcgagtggatgggcgcaccgaggaggctaacgtgccgcct
ttggttgaagggagcaagtcgaaaaaggagagcagagctttgggtgatttcaactccctt
atctctagtccaaggctgggagggagggacaagaagaagctgaagggacagaaagagcag
cagctgaaggccaagaagctgagtaagggcactgccaacagtgagttccaagacagttca
gagagtgagccagagctcttcatcagcggagatgagctgctcaatcagtgccagagtggt
aagaagggctggaagagtaagaggaacctgagggctgccaatgagctggacgagataaag
tgtcggaaggccaacgagaaggaggaccgagggctgggcagccagggcttcgtgtacgtc
atggcgaacaagcagccactgtggaatgaagccacacaggtgtaccagctggactttggt
gggcgcgtcacacaggagtctgccaagaactttcaaattgaactggagggcagacaggtg
atgcagtttggcaggatagatggcaatgcctatatcctggactttcagtatcccttctct
gctgtgcaggcctttgcagtggctttagccaatgttactcaacgcctcaaatga
DBGET
integrated database retrieval system
