Pseudochaenichthys georgianus (South Georgia icefish): 117439943
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Entry
117439943 CDS
T09629
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117439943 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117439943 (capn3b)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117439943 (capn3b)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C2: calpain family
117439943 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
117439943
NCBI-ProteinID:
XP_033931977
EnsemblRapid:
ENSPGEG00000004331
LinkDB
All DBs
Position
24:complement(26639135..26655156)
Genome browser
AA seq
770 aa
AA seq
DB search
MGDEQHREPVVEDIQVKVLYEAEASSGPDEKAAYPPAGTNSIYSAILSRNEAVKDATRLK
TFLELRDKYVKKKVVFEDPLFPANDSSLFYSHKPTMKIEWKRPSEICDDPQFIVDGANRT
DICQGTLGDCWLLAAIACLTVNEKLLYRVIPPDQSFTENYAGIFHFQLWRYGEWVDVVVD
DRIPTCNNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFF
ELSEAPKDLYSIMRKALDRGSLMGCSIDITSAAEMESRTEQGLVKGHAYSIIGLAECDEV
AKDTKIHLIRLRNPWGWVLWKGPWSANSKEWSTISTADKENLKKQTVEESEFWMAFDEFK
KNFTKLEMCNLTPDTLQCEERTSWTVSVNEGRWVRGSSAGGCRNNKNTFWTNPQYRLQLS
EEDDDPEDHQAACTVVVALMQKGRRMQRHQGAKFFTIGFSIYEVPKEMLGQNQHLQKDFF
LYNASKAKCKTYINLREVTERIHLPPGEYVIVPTTFEAHQEGEFILRVFSEKQSITEEED
NVGMDKTQQDTKKKEKPIVFVSDRAKANKEIEHDGIRGEKKKKKKPKINLLEEEEETEEE
KQFRAIYQKIAGDDMQICANELKTVMKNVLSKHNDIKTEGFSLETCRSMIALMDTDGTGK
LNLQEFKHLWKKIKEWQLIFRKYDKDKSCSISSFEMRNAVNDAGFHLNKQLYDIIAMRYA
DEHLNIDFDSYICCFVRLEGMFRAFDAFDKDGDGVIKLNVLEWLQLTMYS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgagcaacatagagagcctgttgttgaagatatacaggtgaaagtgctttat
gaagctgaagcatcatctgggcccgatgagaaagctgcctaccctcctgctggaactaac
tccatctactctgccattctgagccgaaacgaggctgtcaaggatgccacgcgattaaag
acctttttggaacttcgagacaaatacgtgaagaagaaggtggtgtttgaagaccccctg
tttcctgcaaatgactcctcactcttttacagtcacaaacccaccatgaagattgagtgg
aaacgtccctcggaaatatgtgacgacccccagttcattgtagatggagccaacaggaca
gacatctgtcaaggaacattaggtgactgctggctgctcgctgccatcgcctgcctcact
gtgaacgagaagctgctgtacagagtgatccctcccgaccagagcttcaccgaaaactac
gccggcatcttccatttccagttgtggcgttatggagaatgggtcgatgtggtggtggac
gaccgtatccccacctgcaacaaccaactggtcttcaccaaatctttcaggaagaatgag
ttctggagcgctcttctggaaaaagcttatgccaagttgcacggatcgtatgaagccctt
aaagggggcaacactttggaggccatggaggatttcaccggaggggttacagagttcttt
gagttgtctgaagcccccaaagatctctacagcatcatgaggaaggcgctggacaggggc
tcgctgatgggctgctccatagatattacttcagccgctgagatggagtctcggactgaa
cagggtctggttaaaggtcacgcttactccatcataggcctggcagagtgtgacgaggtg
gcaaaggataccaagattcacctgattcgcttacgcaatccctggggctgggtgctgtgg
aaaggaccatggagtgcaaattcaaaggaatggtcgaccatttccacggctgacaaggaa
aacctaaaaaaacaaactgtagaggagagtgagttctggatggcttttgatgaattcaag
aagaacttcacaaagctggagatgtgtaacctgactcccgacaccttgcagtgtgaggag
aggaccagttggacagtgtcggtcaacgagggtcgctgggtgcgcggcagctctgccggc
ggctgcaggaacaacaaaaacactttctggacgaaccctcagtatcggttgcagctgtcc
gaggaggacgacgaccccgaggaccaccaggcggcctgcaccgtggtcgtggctctgatg
cagaaaggtcgcaggatgcagcgccaccaaggggccaagttcttcaccatcggattttcc
atctacgaggtgcccaaggagatgcttggacagaatcaacacctgcagaaggacttcttc
ctgtacaacgcttccaaagctaaatgtaagacctacattaacctgcgggaggtgacggag
cgcatccatcttcctccaggagagtacgtcatcgtccccaccacctttgaagcccatcag
gagggggagttcatcctcagggtcttctctgagaagcagagcattacagaggaggaggat
aacgtcgggatggacaaaacacagcaagacacgaaaaagaaggagaagcctattgtattt
gtgtcagacagagcaaaagccaacaaagaaatcgagcatgacggcattcggggagagaag
aagaagaagaagaagccaaagataaatctactcgaagaagaggaggagactgaggaggaa
aaacagttcagagccatttaccaaaagattgctggagatgacatgcagatctgcgccaac
gaactcaagacggtcatgaagaacgtgctctctaaacataatgacataaagacagagggt
ttcagccttgagacatgtcggagtatgatcgccttgatggatactgatggtacggggaag
ctgaacctgcaggagttcaaacacttgtggaaaaagatcaaggagtggcagctgatcttc
agaaaatacgataaagacaaatcttgctccatcagcagttttgagatgaggaacgctgtt
aatgatgcagggttccacctgaacaaacagctgtatgacatcatagccatgcgctacgca
gacgaacacctcaacatcgacttcgacagttacatctgctgcttcgtgagactagagggc
atgttcagagcttttgacgcctttgacaaagacggagatggagtaataaagctcaatgtc
ctggagtggcttcagctgaccatgtattcttaa
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