Pseudochaenichthys georgianus (South Georgia icefish): 117439978
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Entry
117439978 CDS
T09629
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04020
Calcium signaling pathway
pgeo04148
Efferocytosis
pgeo04218
Cellular senescence
pgeo04310
Wnt signaling pathway
pgeo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117439978 (nfatc3a)
04310 Wnt signaling pathway
117439978 (nfatc3a)
04020 Calcium signaling pathway
117439978 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117439978 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
117439978 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117439978 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117439978 (nfatc3a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117439978 (nfatc3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
117439978
NCBI-ProteinID:
XP_033932040
LinkDB
All DBs
Position
3:complement(44293998..44357770)
Genome browser
AA seq
1085 aa
AA seq
DB search
MTTANCPGNEELDFRLIFGEDGQQQPLGPADLEPDDNTSFYILNVGQPQSMITNHQSLGL
PRHGMPSHSQFISSSPRLHSHRQGSDPPRYEAPDSKYGSSPLLPSAPLEAPKAFECPSIQ
ITSISPSCQQEMDANEQDLRANGPDGDYHVDRPVSRDHLYLPLDHSYRDTSLSPSPCSSL
SSRSWFSDASSCESFSHVYDDVDSELNEAAARFTLGSALTSPGCISPQTCGGVLEEQPNW
QHHHPAFVHHSHSISLSPRTSPCHSPRTSVTDENWLSPRPTSRPSSRPTSPCGKRRHSSA
DICYPASLSPHHSPSPTPGPSPRGSVTEDTWIGSPSLGMSPFQCCPSEADIPSKTRKTSQ
DRTAMQTGTGEMGLDDQGNMSPNLDSPSDDGLHSLKKDGPGEQFLSVPSHFSWNKPKPGH
TPIFRTSSLPPLDWPLPSQFGQYELKIEVQPKAHHRAHYETEGSRGAVKASSGGHPIAKL
IGYTEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIVVTSTKVLEIPLLPE
NNMTAGIDCAGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQPNGKVLSLQAASIP
VECSQRSAQELPQVEKFSLVSCLVSGGEEMVITGSNFFPESKVIFLEKGPDGRPQWEVEA
KIMREKTQGSCIIVEVPPYHSKSVGSAVQVQFYVCNGKRKRSQSQRFTYLSVLVKQEHRE
ELDLSAVSPMSLPLAHAGGLVRPQLPSPEQCHPSDGLLSGSPHGLLPLQGPCPSLGSPPF
QHLPHLQSRSLHHPPADFHMTFHPTPAPLPAPPRPSYQSMQHGHSLPFNGQSPLPPQGYE
RMPFQHSVSAASHPMGMGMVSPFSPCSSPSAPPSSNSIAGSPQSQQPMLSPSSPRLHTLG
GYHCSPNPPQMPSPGGHPLAGQHPSQLQRAMGYHPVGQRSASCPTPSSAPATRMIPSPHS
GPSSPQLQSLPYQSPTSSSPTSGGSPLGPMQQQHSGQHSPQATSPVMASLSPVAAGPQIH
PLSPQGPFPSDEERPDIKEEPEEKEPTFRSIGLQDITLDDVNEIIGRDMSQSPSTHGPPS
AHNQS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgctaactgccccgggaatgaggagctggacttcaggctgatcttcggggag
gacgggcagcagcagccgctggggcctgcagacctggagcccgatgacaacacgtcgttc
tacatcctgaatgtgggccagccccagtctatgatcaccaaccaccagtctcttggcctg
cctcgtcatggcatgccgtcccactcccagttcatcagctcctccccacgccttcactca
cacagacaaggatcggatcctccgagatatgaagccccagactccaagtatggctcctcc
cctctgctgccctcggctcctttggaggctccgaaggccttcgagtgccccagcatccag
atcacctccatctctcccagctgccagcaggagatggacgccaatgagcaggatctgagg
gccaatgggcctgatggggactatcatgtggataggcccgtgtccagagaccacctgtac
ctgcctctggaccactcgtaccgggacacttcgctcagcccgagtccgtgcagcagcctc
tcctctcggagctggttctctgacgcctcctcctgtgaatctttctcacacgtctatgac
gatgttgactcggagctaaacgaggcggcggcccgcttcaccctcggctccgctctgact
tccccgggatgtatctcccctcaaacctgtgggggggttttggaggagcagcccaactgg
cagcaccatcaccccgccttcgtgcaccactcccactccatcagcctgtcaccccggacg
tccccgtgccactcgccacgcaccagtgtcaccgatgagaattggcttagcccgcgtccc
acctctaggccctcctcacgtcccacctcaccctgtgggaagaggcgccactccagcgct
gacatctgctaccccgcctccttgtctcctcatcactcaccctcacccacaccaggacct
tcacccaggggcagcgtgacggaggacacatggatcggcagtccttctttaggcatgtct
cccttccagtgctgtccatcagaggcagacatcccgtccaagaccaggaagacgtcgcag
gacagaacagcaatgcagactgggacaggggagatggggctagatgaccaaggaaatatg
tctcctaatctagactctccttctgacgatggtctccacagtctgaagaaggacgggccc
ggggaacagttcctctcagtgccctctcacttctcatggaataaacccaaacctggtcat
acgcccatattcaggacctcctcactgcctcctctggactggccgctgccgagccagttt
ggccagtatgaattgaagatagaagtgcaacccaaagcccaccaccgagcgcactacgag
accgagggcagccgaggagccgtcaaagcttcttccggtggccacccgattgccaagctc
attggctacactgagaagcccatcaacctgcagatgttcatcggaacagcagacgaccgc
tacttgaggccgcacgccttctaccaggtgcaccggatcaccgggaaaactgtagccacg
gccagccaagaaattgtagtcaccagcaccaaagttctcgaaattcctctcctgcctgaa
aacaacatgacagccggcatcgactgtgctggcatcttgaagctgcggaactcagacatc
gagctgcggaagggggagacggatatcggaaggaagaacacacgggtccgcgtggtcttc
cgagtccacatcccacaacccaacgggaaggtgctctctctgcaggccgcctctatccct
gtggagtgctcccagcgttcggctcaagagctgccccaggtggagaaattcagcctggtc
agctgtctggtcagcgggggagaagagatggtcatcaccggctccaacttcttcccagag
tccaaggtcatcttcctggagaaaggccctgatggacgaccacagtgggaagttgaggca
aaaataatgcgtgagaaaactcaaggatcgtgcatcattgtggaggtccctccctaccac
agtaagtctgtgggctcagctgtgcaggtgcagttttacgtctgcaatggcaagcggaaa
aggagccaatcgcaacgcttcacttacctgtcagtgttggtaaaacaggaacacagagaa
gagctggacctctctgccgtctcccccatgtccctccccctggcccatgctggcgggctg
gtgcgcccccagctgccctctccggagcagtgccacccatcggacggccttctgtccggc
tccccccacggcctgctccccctgcagggcccctgcccctccctgggctccccgcctttc
cagcacctgcctcacctccagagtcgcagcttgcaccacccccccgcagacttccacatg
acgttccacccgacccctgctcctctccctgcgcccccccggccctcctaccagtccatg
cagcacggccacagcctgcccttcaacggccagtcccccctcccccctcagggctacgag
aggatgcccttccagcacagcgtctctgcagcgtctcacccaatggggatggggatggtg
tcccctttctccccgtgctcctcaccatcagctcccccctcctcaaacagcatagctggg
tctccccagagccaacaaccgatgctctccccctcatccccacgcctgcacacactcgga
ggctatcactgctccccaaaccccccccagatgccctctcccggcggccaccccctcgcg
gggcagcacccctcccagctgcaaagagcgatgggctaccaccccgtgggtcagaggtca
gcctcctgtcccaccccgtccagcgcccctgctaccaggatgatcccctctccccactca
gggccttcctcccctcagctccaatcgctgccctaccagtctcccacctcctcctccccc
acatcaggtggcagtcctctggggcccatgcagcagcagcactcaggtcagcactccccc
caggccaccagcccggtcatggccagcctctccccggtggcagcggggcctcagattcac
cctctgagcccacagggacccttcccctcggacgaagagaggccggacatcaaagaggag
cctgaggagaaggagcccaccttccgctccatcggcctacaggacatcacgctggacgat
gtgaatgaaatcatcggcagagacatgtcccagtcccccagcacccacggtcctccgtca
gctcacaaccagtcatag
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