Pseudochaenichthys georgianus (South Georgia icefish): 117440002
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Entry
117440002 CDS
T09629
Symbol
ddx51
Name
(RefSeq) ATP-dependent RNA helicase DDX51 isoform X1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgeo03009
]
117440002 (ddx51)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117440002 (ddx51)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
Pre-60S particles
Helicases
117440002 (ddx51)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
117440002
NCBI-ProteinID:
XP_033932071
LinkDB
All DBs
Position
24:5058166..5072548
Genome browser
AA seq
680 aa
AA seq
DB search
MSLFVVNRYLGEEENGSISKESRSQALLAKLQQKAKEKQRQSLTEETQKPPKERTQKDVK
KKRKADKDSSQEPEHNKKRKSEAAAVIVSEKDNHDEPVEEEEKKKKKKNQTSANEKRKKK
KDQSGISVKSLPDTRVTGRAGLEETAGGEEKTETENIAPEQTAEKTPAPTGFTVLGGFDN
KPVQKVHRVLPQWLAQPDVIHRDIKGHLVNISEIHGLSALLVKKLQNSGIQNFFPVQAEV
IPAVLESAQQGLLIGRGGYKPRDICVSAPTGSGKTLAFVIPVIQVLMERVVCEVRALAVL
PTKELAQQVCKVFASYAEGTSLKVVMLAGQKSFAAEQSCLSELRGGMRRSLADIVVATPG
RLVDHINKNSGFSLEHLRFLIIDEADRMIDSMHQSWLSQVVKAVYRPGSGQEAMSIFRRA
EPAHVTAASLSPPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSIHSQSSTISTPGST
ADPPHTQGCFNFPEGLTEYYVPCTLSKKPLLILHFILRMKLRPILCFTNSREAAHRLFLL
VQLFGGVQAAEFSSRLSPADRKKTLKEFEQGKIQLMISTDAAARGIDINGVKCVVNYDAP
QYIRTYIHRIGRTARAGKTGLAFTFLLGVQEKNFLQMVVEAGTPGIQKQIVKPESLKGME
ARYEQTLQELANVIKDEKTR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttgttgtaaacaggtatcttggagaggaggaaaatgggagcatctcgaag
gagtctcgctctcaggcgttactggctaagctgcaacagaaggccaaagagaagcagaga
cagagtttgacggaagaaacacaaaagccacctaaagaacggacgcaaaaggatgtcaaa
aagaaaagaaaagctgacaaggacagcagtcaggagcccgaacacaacaagaaacggaaa
tctgaagcagcagctgttattgtctcagagaaggataaccacgacgagccggtcgaggag
gaggagaagaagaagaagaagaagaatcagacgagtgcaaatgagaagcggaagaagaag
aaggatcagtcaggcatttcagtgaaaagtcttcctgacactcgtgtgactggaagagca
ggactggaggaaacagcaggaggagaagagaagacggagacagaaaacatcgcaccagaa
caaaccgcggaaaagactcctgctccaaccgggttcacggtcctgggaggatttgacaac
aaacctgtccaaaaggtgcacagagtgctccctcagtggctggctcagccggatgtgatc
cacagagacattaaagggcacctggtgaacatctccgagatccacggactctccgctctg
ctcgtgaagaaacttcagaatagtggaatccagaactttttcccagtgcaggcagaggtg
atcccggccgtcctggagagcgctcagcaggggcttctgattggacgagggggctacaag
cccagagacatctgtgtgtctgctcctacaggcagcggcaagacgctggcgttcgtcata
cctgtcatccaggttctgatggagcgggtggtgtgtgaagtccgtgctctggccgtgttg
ccgaccaaagagctcgcccagcaggtgtgcaaagtgtttgcgtcgtacgctgaggggacc
tctctgaaggtggtgatgctggccggacagaagtccttcgctgcagagcagagctgcctg
tcggagctcagggggggcatgagacgcagtttagcggacattgttgtggccactccaggt
cggctggtcgatcacatcaacaagaattcaggcttcagtctggaacacctcaggtttcta
attatagacgaggccgacaggatgattgacagcatgcaccagtcgtggctcagccaggtg
gtgaaggcggtgtacagaccaggaagtggacaggaagccatgtccatcttcaggagggcg
gagccagcacatgtgacagcagccagtctgtcccccccccagatgccgctgcagaagctg
ctattctctgccacactcacacagaacccagagaagctgcaacagctgggcctccaccag
ccccgacttttcagctccatccacagccagtccagcactatcagcacccccggcagcacg
gcagaccccccccacacacagggctgcttcaacttccccgaaggtctcacggagtactac
gttccctgtacgttaagcaagaagcctcttctcatcctccacttcatcctgcgcatgaag
ctccgccccatcctctgcttcaccaactccagggaggcagcacacaggctgttcctgctg
gtgcagctctttggtggcgttcaggcggccgagttctcctccagactgtctcctgctgac
aggaagaagacgctgaaggagtttgaacaaggaaagatccaactgatgatcagcacagac
gcagccgccagaggcatcgacatcaacggggtcaaatgtgtggtgaactatgacgcaccg
cagtacatccggacatacatccacaggattggaaggacagccagagcagggaaaacgggc
ctggccttcaccttcctgctgggagtacaggagaagaacttcctgcagatggtggtggag
gcaggaacgcccgggattcagaagcagatcgtcaaaccagagagcctgaaggggatggag
gcgcgctacgaacagacgctgcaggagctggccaacgtcatcaaggatgagaaaaccaga
taa
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