Pseudochaenichthys georgianus (South Georgia icefish): 117440020
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Entry
117440020 CDS
T09629
Symbol
dtl
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117440020 (dtl)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117440020 (dtl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_TEP1_C
Beta-prop_DCAF4
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WD_LRWD1
MIOS_WD40
Beta-prop_WDR11_1st
WDR54
Beta-prop_IP5PC_F
TAF1C_beta-prop
Motif
Other DBs
NCBI-GeneID:
117440020
NCBI-ProteinID:
XP_033932102
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All DBs
Position
24:26860996..26868657
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AA seq
656 aa
AA seq
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MLFRSIVDRGVGKRRQNAVLADPGPRHPLSSLLGGYHCVRHDEHISYGNLGDSVPPFGLA
FSSAGHMQNILAAANEEGIVRIYDTESREKPLLKEWLAHENAVFDIAWVPGEPHLVTAAG
DQMAKLWDVRSGEMLGSFKGHLCSLKSVSFAPQEKAVFCTGARDGNIMVWDTRCSKKDGF
YRQVNQISGAHNKAETNPLTKTKKRRVSTRGMAPSVDSQQSVTVVLFQDQHTLISSGAVD
GVIKMWDLRKNYTALRQDPVPLQTYPYPGSCMRMRLGYSGLVLDSTRSNIVCNCTDDNIY
MFNVSGTKTTPVAAFSGHQNSSFYVKSTISPDDQFLASGSSDNNAYIWKISEPNQPPTML
QGHSEEVTSVAWCPTDLTKIASCSDDHTVRIWRLHRKMDGAEASVGKANLVGWARLKSPS
GPSIRAETTPAKIQKTESLGGLASPRLAACAPSGAAMPLPSSTTSPIPSQGAKAAAVRQR
TPSSIKKWLSPSRGSPAQASPQPRRVLSLCPQIPASSASPGERRAKRRLETGEGSSAGCG
GAEQCDCVTELYPAAKRSRALSGICCSKQESRLQTGCPTEDSEQLSQTGKENCSPGPMDW
LSVLGQKMRKGQGSPRSPRSPSASKRQEGKTPVSPTIRSPQSIKKISMYFARSPLE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgctgttccgctcgatagttgacagaggagtgggcaaacgaaggcagaatgccgtcctt
gccgaccccgggccgaggcaccccctgagctctctgctgggggggtaccactgcgtccga
cacgatgagcacatctcttacggcaacctgggggactctgtgcccccgtttggactggcc
ttctcctctgccggacacatgcagaacatcctggcagcagctaatgaagaaggcattgtt
agaatctacgacacagagagccgggagaagccacttctaaaagaatggctggcccacgag
aacgctgtttttgacatagcctgggtaccgggggagcctcacttggttactgcggctggt
gatcagatggccaagctgtgggatgtgaggtcaggggagatgttaggcagcttcaaaggc
cacctctgcagcctcaagtctgtttcattcgcaccacaggagaaagctgtgttctgcact
ggggccagagatggaaatattatggtctgggacaccaggtgcagcaaaaaagatggtttc
tacaggcaggtgaaccagatcagtggcgctcacaacaaagcagagacaaaccccctcacc
aaaaccaagaagaggcgggtcagcacacgtggcatggctcccagtgtggacagccagcag
agtgtcaccgtggttctgttccaggatcagcacaccctcatctcctctggggctgtcgat
ggtgtaatcaagatgtgggatctgaggaagaactacactgcactccgtcaggatcctgtt
cctctgcagacgtacccctacccgggttcctgcatgcgcatgagactgggttattccgga
cttgttctggactcaaccagatccaacatcgtatgtaactgcactgatgataatatctac
atgttcaatgttagcggaacaaaaacaactccagtggcagctttcagtggccaccagaac
tcctccttttatgtaaagtccactattagccccgatgaccagttcttagccagcggttca
agtgacaataacgcatacatctggaagatctcggagcctaatcagcctcccacgatgctc
caaggccatagtgaggaagtgacatctgttgcatggtgtccgacagatttgaccaagatt
gcttcctgttctgatgatcacactgtacgtatctggaggcttcaccggaaaatggatgga
gccgaagcctcagtgggaaaggccaaccttgtcggctgggcacgtcttaaatctccctca
gggccttcgatcagagctgaaacaacccccgccaagatccagaagacagagagcctcggc
ggcctggcgtccccccggctcgctgcctgtgctcccagcggagccgcaatgcctctcccc
tccagcaccacctctcccatcccttctcagggtgccaaggctgccgctgtccgccagaga
acaccatcctctatcaagaaatggttatccccgagccgtgggtctcctgctcaggccagc
cctcagcctcgccgcgtgctcagtctgtgtcctcagatcccggcgagcagcgcctctccc
ggcgagcgacgggccaaacgcaggctggagacgggagaggggtcttctgcaggctgtggg
ggggcagagcagtgtgactgtgttaccgaactctacccggcggccaagagaagccgggct
ctgtcggggatctgctgctccaagcaagagagccggctacagacaggctgtcccacagag
gacagcgagcagctctctcagaccggcaaggagaactgctcccccggacccatggactgg
ctgtcagtgctgggccagaagatgaggaaaggtcaaggaagcccgaggtctcccagaagc
cccagtgcctctaagagacaagaaggcaagacaccagtttctccgacaatccgctcaccg
cagagcataaagaaaatctccatgtatttcgcaagaagccctctggagtga
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