Pseudochaenichthys georgianus (South Georgia icefish): 117440103
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Entry
117440103 CDS
T09629
Symbol
efhc1
Name
(RefSeq) EF-hand domain-containing protein 1
KO
K23029
EF-hand domain-containing protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117440103 (efhc1)
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117440103 (efhc1)
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117440103 (efhc1)
Cilium and associated proteins [BR:
pgeo03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
117440103 (efhc1)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
117440103 (efhc1)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
117440103 (efhc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DM10_dom
MtxA_C
Motif
Other DBs
NCBI-GeneID:
117440103
NCBI-ProteinID:
XP_033932245
LinkDB
All DBs
Position
24:25142741..25146919
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AA seq
552 aa
AA seq
DB search
MSLNMNSTFRDVRKSAFHRSQTLVYRNGFAVPRRPTVGIGQDPLLSEQLIQQQISELSSE
TPYITRGSYQEQGLVEDFIPAYVALDKKVLRFYAYFEEDILFSSKEQHRVCPVVIYYYLE
DDSICIFEPRVENSGIPQGERIKRQRLPRNEHGEPYLWKNLNIGMYLEVYGVKYNITQCD
AFTKEFMESEGIVLNDPQPMPVDPYGQSRKNTLPSHITPSNFDQMQQFIDMDRKVLRFFA
LLDDADALFADTRAVTIQFYLGDNTVEIREVHEANSGHDPFPILMHRQKLPKTFKATPQS
FPSCVLEVSKAEVEEYYTPKDFQTGQTMKLRGRRFLLYDCDGFTKEYYQENHPDIQMKPS
EVPNKTSLVQLRKKEVPPYNGFGSLEDSLQNCLYLIPEPPKKNVLKMLENNNKVLCYSAR
MESQNPDDDGRLFILSYSLANDMISIYEKPTRNSGIIAGKFLKDTRISKPGSSLENPEFY
SPADFAIGATLHVFGRRFVLTDADQYVLNYLESNAGQIPHQTLLSIHQKLGVRTENNQAH
DQNGDDGAEPSS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgaacatgaatagcacttttcgggatgtaaggaagtcagccttccatcgttcc
cagactctggtctacaggaatggctttgctgtgcctcgtcgccccactgtgggcattgga
caggaccctcttttatcagagcagctgatccagcagcagatcagtgagttgtcctctgag
acaccatacattactcgtggctcctatcaagaacaaggcctagttgaagacttcatccca
gcttacgtggcccttgacaagaaggtgctgcggttctatgcatactttgaggaagatatc
ctgttttcctctaaggagcagcatcgtgtgtgccccgtggtcatttactactaccttgag
gatgacagcatttgcatttttgagcccagggtggagaattctgggataccgcagggggaa
cggattaaacgccagcgtctgcccaggaatgaacatggggagccttatctatggaagaac
ctcaatattggcatgtacctggaggtgtacggggtcaagtacaacatcacacagtgcgat
gctttcactaaggaattcatggaaagtgaaggcattgttctgaatgaccctcagccaatg
cctgtggatccttatggccaaagtagaaaaaacactctgccttcccacataacaccctcc
aactttgaccagatgcaacaatttatcgacatggatcgaaaggtgctgcgtttctttgcc
ctgttggatgatgcggacgctctgttcgcggacaccagggccgttaccatccagttctac
ctgggggacaacacagtggagatcagagaggtccacgaagccaacagcggccacgatcca
ttccccatcctgatgcaccgacagaagctgcccaagacatttaaagctacgcctcagagc
tttcccagctgtgtgctggaggtttccaaagcagaagtagaggagtactacactcctaaa
gacttccagacgggtcaaacgatgaagctgcggggccgtcgcttcctgctgtacgactgt
gatggcttcactaaagaatattaccaggagaaccaccctgacatccagatgaaaccctca
gaggtaccaaacaagaccagcctggttcagctgaggaaaaaggaggttcctccctataat
ggttttggatccctcgaagactctctccagaattgtttgtatttaattcctgagcctccc
aaaaagaacgtgttgaagatgttagaaaacaacaacaaagtgttgtgctacagtgccagg
atggaatcccagaatcctgacgatgatggccgactcttcatactgtcctactccctggct
aacgacatgataagtatttatgaaaagcccactcgcaactctggtatcattgctggaaag
ttcctgaaagacacacgcatctccaaaccgggctcttcattggagaatccggagttctac
tcacctgcggactttgctattggagccactctgcacgttttcggccgtcgctttgtgctt
accgatgctgaccaatatgtgctgaactacctggagtccaacgccggccagatcccgcat
cagactctgctttctattcaccagaagcttggtgtgaggacagaaaacaaccaggcacat
gaccaaaatggtgatgatggagcagagccatcttcatga
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