Pseudochaenichthys georgianus (South Georgia icefish): 117440199
Help
Entry
117440199 CDS
T09629
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117440199 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117440199 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pgeo03310
]
117440199 (esr1)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
117440199 (esr1)
Nuclear receptors [BR:
pgeo03310
]
3. Estrogen like
3A. Estrogen receptor
117440199 (esr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
117440199
NCBI-ProteinID:
XP_033932382
LinkDB
All DBs
Position
24:23894074..23914946
Genome browser
AA seq
601 aa
AA seq
DB search
MLLRQSPAQSRHPCGPALRPRISPAFPELETLSPQRPSPPPRVPFSDMYPEESRGSGATV
DFLEGTYDYAAPTPAPTPLYSHSTAGFYSPPLDAHGQPSDGSLQSLGSGPASPLVFVPCS
PRLSPFMHPPSHHYLETTSTPVYRSSLPSVSREDLCGTSEESFSVGESGAGAGGFEMVKE
TRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQACR
LRKCYEVGMMKGGVRKDRGRVLRRDKARTDTTDRVKAPKDLEQRTVPPVDGRRRSSAFGG
GVRSTLNGMPPDQVLLLLQGAEPPTLCSRQKLSRPYSEVTVMTLLTSMADKELVHMIAWA
KKLPGFLQLGLHDQVQLLESSWLEVLMIGLVWRSIHCPGKLIFAQDLILDRNEGNCVEGM
AEIFDMLLATASRFRLLKLKPEEFVCLKAIILLNSGAFSFCTGSMEAFHDTAAVQIMLDT
ITDALIHHISQSGGSVQQQSRRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVPLYDLLL
EMLDAHRLHRPDRPGQPWTPADGEPPPSGSGGGPRIYNESASRAPTVLQYGGSRSDCTPI
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcaggcagagcccggcgcagagcaggcacccgtgtggaccagcactcagaccc
aggatcagcccagccttcccagagctggagaccctctccccgcagcgaccctcgcctcca
ccgcgggtccccttcagtgacatgtaccctgaagagagccgggggtctggagccactgtg
gacttccttgaagggacctacgactatgcggcgcccacccctgccccgacccctctctac
agccactccacggcgggcttctactctcctcctctggacgcccacggacagccctcggat
ggcagccttcagtccctggggagtgggccagctagtcctctagtgttcgtgccctgcagc
ccccgactcagcccctttatgcacccccccagccatcactatttggaaaccacctcaact
cctgtgtacaggtccagtctgccgtcagtttccagagaggacctgtgcggcaccagcgaa
gagtcgttcagcgtgggggagtcgggggccggggccggggggtttgagatggtcaaagaa
acgcggttctgtgccgtgtgcagcgactatgcttctgggtatcactacggggtgtggtcc
tgtgagggctgcaaggccttcttcaagaggagcatccagggtcacaatgactatatgtgc
ccagcaaccaatcagtgtactatcgacaggaatcggaggaagagctgccaggcttgccgt
cttaggaagtgctacgaagtgggcatgatgaagggaggtgttcgtaaggaccgcggccgt
gttttgcgacgtgacaaagcgcggacggacaccactgatagagttaaggcccctaaggac
ctggagcagaggacagtgccccctgtggacgggaggaggcgcagcagtgcttttggtgga
ggagtacgatcaacactgaatggcatgcctcctgaccaggtgctcctcctgctccagggt
gcagagcccccaacactgtgctcccgtcagaagctgagcagaccctactccgaggtcacc
gtgatgacgctgctcaccagcatggccgataaggagctggtccacatgattgcctgggcc
aagaagcttccaggcttcctgcagctggggctccatgaccaggtgcagctgctggagagc
tcctggctggaggttctgatgatcgggctcgtctggaggtccatccactgccccgggaag
ctcatctttgctcaggacctcatactggacaggaacgaaggaaactgtgttgaaggcatg
gcggagatcttcgacatgctgctagcgacggcttcacgcttccgcttgctcaaactcaaa
cccgaggagtttgtctgtctcaaagccatcatcttgctcaactctggggccttctctttc
tgcaccggctccatggaggccttccacgacacggcggcggtgcagatcatgctcgacacc
atcacagacgctctcatacatcacatcagccaatcaggaggctcggtgcaacagcagtcc
agacgacaggcccagctgctcctcctgctctcacacatcaggcacatgagcaataaaggg
atggagcacctctacagcatgaagtgcaagaacaaggtgccgctgtacgacctgctgctg
gagatgctggacgctcaccgcctgcaccgccccgacaggccaggccagccctggaccccg
gctgacggagagcccccccccagcggcagtggaggaggaccacgaatctacaatgagagc
gccagcagagccccgacagtcctgcagtatgggggctcccgctcggactgcacccccatc
ctatga
DBGET
integrated database retrieval system
