Pseudochaenichthys georgianus (South Georgia icefish): 117440794
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Entry
117440794 CDS
T09629
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
pgeo03015
mRNA surveillance pathway
pgeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117440794 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
117440794 (eif4a3)
03015 mRNA surveillance pathway
117440794 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117440794 (eif4a3)
03041 Spliceosome [BR:
pgeo03041
]
117440794 (eif4a3)
03009 Ribosome biogenesis [BR:
pgeo03009
]
117440794 (eif4a3)
03012 Translation factors [BR:
pgeo03012
]
117440794 (eif4a3)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117440794 (eif4a3)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117440794 (eif4a3)
mRNA cycle factors
Stress granule specific factors
117440794 (eif4a3)
Spliceosome [BR:
pgeo03041
]
Complex C
Other components
EJC/TREX
117440794 (eif4a3)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
90S particles
Helicases
117440794 (eif4a3)
Translation factors [BR:
pgeo03012
]
Eukaryotic type
Initiation factors
eIF-4
117440794 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
117440794
NCBI-ProteinID:
XP_033932920
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MAVAAVTSGGRKRLMREEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGVYAYGFEKPSA
IQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQ
KVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRAIKM
LVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKR
DELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFT
VSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIH
RIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgccgctgtaacatcaggagggaggaagaggctcatgagggaggaggacatg
acgaaagtagagtttgagaccagcgaggaggtggatgtgacgccgaccttcgacacgatg
gggctgcgggaggacctcctgaggggggtctacgcctacggttttgagaaaccgtcagcg
atccaacagagagcgatcaaacagatcatcaaggggagagacgtcattgcacagtcccag
tcaggaacgggaaagaccgccaccttctgtgtgtcggtgctgcagtgtctggacatccag
gtgagggagacgcaggctctgatcctggctcccacccgagagctggctgggcagatccag
aaggtgctgctggctctgggagactacatgaacgtgcagtgccacgcctgcatcggggga
accaacgtgggcgaagacatccgcaagctagactacggacagcacgtggtgtcggggacg
ccagggcgcgtgttcgacatgatccggcgccgcagcctgaggactcgagccatcaagatg
ctcgttctggacgaggcggacgagatgctgaacaaaggcttcaaggagcagatctacgat
gtgtaccgctacctgccccccgccacccaggtatgtctgatcagcgccacgctgccccac
gagatcctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtgaagcgt
gatgagctgactctggagggcatcaagcagttcttcgtggccgtggagagagaagagtgg
aagtttgacacgctgtgcgacctttacgacactctgaccatcactcaggctgtcatcttc
tgcaacaccaagagaaaggttgattggctgacggagaagatgagggaggcgaacttcacc
gtgtcctcgatgcatggagacatgcctcagaaagagagagagtccatcatgaaggagttc
agatcaggagccagtcgggtcctgatctccacagatgtctgggctcgaggtctggacgtt
cctcaggtttctctcatcatcaactacgacctgcccaacaacagagagctctacatccac
aggatcggtcgttcaggtcgttacgggcgaaaaggtgtcgccatcaacttcgtgaagaac
gacgacatccggatcctgcgagacatcgagcagtattacagcacgcagatcgacgagatg
cccatgaacgtggccgacctgatctaa
DBGET
integrated database retrieval system
