Pseudochaenichthys georgianus (South Georgia icefish): 117440972
Help
Entry
117440972 CDS
T09629
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117440972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117440972
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117440972
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117440972
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117440972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
117440972
NCBI-ProteinID:
XP_033933063
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MDPPPPVVLQLSVCKELQLPDSEYNYTADLVAVSSAAPLETAGVQSISVLVLSVEGTARL
WPSLSQEGNFTETDVDLGDLCNFVLAVKGRSFILTSEKNHLMRASVDSSGKLQYRALQRG
QGVLSGIGRRVSSLFGILSPPANDTLHSVMWAGGSSSLYTLSSSSLSKWELGDSWEHQVL
NWDAQKALTESIADAIWGSESNYEELKEGANVTYLDMKLSQSGLVVLAAAWHLSDSPCLV
YFCLVTLQDTGAAIADNFIVEVTKHNAPFQSEEALQETRLVLPLSPGGTAFLYNQELVFA
CSTGTSRGGPPDEKISFTTSGDGVRGGGCCANLPVFFSQNSGLVAVVARESVSILPETME
DSLCSSLAAAPESSAMETLSRAEPVAQEDKTKLLKAAFLQFCRNDLVGAQTVTDEIFPPD
GDGEEGSELDSLVTRIDLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAH
GCFMEFLLQVGLLDRLGQVTVRSSPMATRLLLCEHAEKLQAAMVLKNLHSKHAELVNRAI
SAALERGSAAVPPSLTAADVFFREVSQISSVFDCLLDEEDRSLKENPVDSVQWAEVILTV
NNIIKDMLQAAGHYRETKAFMYRASENSAAEPEYIPWTASGGVGGARSVISRQHEIILRS
VYPNADSELRSALCEQLVALLDIHLGGYVAQLTSLTPLQQERYNSLEMEYSQRRSELLAP
LLELGQYQWVAALAEKYCDFDILVQMCEQTDNQSRLQHYMSKFADQNFADFLFRWYMEKG
KRGKLLSQPAAQHQQLASFLQSHQHLSWLHHIHVHDYRSANRTLHSQADAETRYFVKKKT
LLALSKLTMLASDLPEDQLNKHVDDMVEQERFLLHQETLPRQLLEERQLNPDTMPLLSAH
SLIQLYICDENRRANEYDFKKALDLLEYIDEEEAEDIDLLKCEIFGKALRRDDWSSADGS
DDPLEAAKDSIFIKVLLKLIQEGVPLQTYLPDVKELLELDELSSLKSKPYFEFVLRANYE
HYLEAQM
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcccccccctgttgtcctgcagctctcggtgtgtaaggagctgcagcttccc
gacagcgagtacaactacacggccgacctggtggccgtgtcctccgccgctcctctggag
acggccggcgtccagtccatctccgtgctggttctgtctgtggagggaacggcccggctg
tggcccagtctgtctcaggaggggaacttcaccgagacagacgtggacctgggggacctc
tgcaactttgtgctcgctgtcaaaggcaggagcttcatcttgacctcggagaagaaccat
ctcatgcgagcgagtgtcgactcttctggaaagcttcagtaccgcgcgctgcagcgaggg
cagggcgtcctctctgggatcggacgcagggtctccagtctgttcggcatcctctccccg
ccggccaacgacacgctccacagtgtgatgtgggcgggggggtccagctctctgtacaca
ctgagcagctccagcctcagtaagtgggagctgggggacagctgggagcaccaggtcctc
aactgggacgctcagaaggctctgacggagagcatcgccgacgccatctgggggtcagag
agcaactacgaggagctgaaggagggagccaacgtgacgtacctggacatgaagctcagc
cagtccggtctggtggtcctggctgcagcctggcacctgtcagactctccctgcctggtg
tacttctgcctcgtcacgctgcaggacaccggagccgccatcgcagacaacttcatcgtg
gaggtcaccaaacacaacgcccccttccagagtgaggaggcgctgcaggagactcggctg
gtgttgcctctctcgcccggcggcaccgccttcctctacaaccaggagctggtgttcgcc
tgctccacaggaaccagccggggggggccgcctgacgagaagatcagcttcaccacgtcc
ggcgatggtgttcgtggaggcggctgctgcgccaacctgcccgtgtttttctctcagaac
agcggcctggtggcggtcgtggcccgggagagcgtctccatcctgccggagaccatggag
gactcgctgtgctcctcgctggctgccgctccagagagttcggccatggagactttgagc
cgagcggagccggtggctcaagaggacaaaaccaaactgctgaaggcggcgttcctgcag
ttctgccgcaacgacctggtgggcgctcagacggtcacagacgagatcttcccccccgat
ggagacggggaggaggggtcggagctggacagcttggtgacccgcatcgatctggacctc
gtggacgattaccccgcctcggacccccgctgggccgagtccgtgcccgacgagagcgct
gggttccctctcacctccctcatcatcctccatcagctggaggacaagatgaaggcccac
ggctgcttcatggaattcctgctgcaggtgggtctgctggatcgcctcggccaggtgacg
gtgcgctcgtctcccatggcgacgcgcctgctgctgtgcgaacacgccgagaagctgcag
gcggccatggtgctgaagaacctgcactccaaacacgccgagctggtgaaccgggccatc
agcgccgcgctggagaggggcagcgccgccgtgccgcccagcctcaccgccgcagacgtc
ttcttcagagaggtctctcagatctcctcggtgttcgactgcctgctggacgaggaggat
cgcagtctgaaggagaacccggtggactcggtgcagtgggccgaggtcatcctcaccgtc
aacaacatcatcaaggacatgcttcaggctgccggacactacagagagacgaaggccttc
atgtacagagcttctgaaaactctgctgccgagccagaatacatcccgtggacagcgtcc
ggaggtgttggcggcgctcgctccgtcatctctcggcagcacgagatcatcctgcgctcc
gtgtatccgaacgcagactcggagctgcgcagcgccctgtgtgagcagctggtggcgctg
ctggacatccacctgggcgggtacgtggcccagctgacctccctgacccccctgcagcag
gagcgctacaacagcctggagatggagtacagccagcggcgctccgagctgctggcgccg
ctgttggagctgggtcagtaccagtgggtggcggcgctggcggagaaatactgcgacttc
gacatcctggtgcagatgtgcgagcagacggacaaccagagccgcctgcagcactacatg
agcaagttcgctgaccagaactttgctgacttcctgttccgctggtacatggagaaaggg
aagagagggaagctgctctctcagccggcggcgcagcaccagcagctcgccagcttccta
cagtctcaccagcacctcagctggctgcaccacatccacgtgcacgactaccgcagcgcc
aaccgcacgctgcacagccaggcggacgcggagacgcgctacttcgtgaagaagaagacg
ctgctcgctctcagtaaactcaccatgctcgcatccgacctgccggaggaccagctcaac
aaacacgtcgacgacatggtggagcaggagcgcttcctgctgcatcaggagactctgccc
cgacagctgctggaggagaggcagctgaacccggacaccatgcctctgctcagcgctcac
agcctcatccagctttacatctgcgatgaaaacaggcgcgccaacgagtacgacttcaaa
aaggctctggatctgctcgagtacatcgacgaggaggaagccgaggacatcgacttgttg
aagtgtgagatcttcggcaaagcgctgcggagagacgactggtcctctgctgacggcagt
gacgatcctctggaagcggccaaagacagcatcttcatcaaagtcctcctcaaactcatc
caggaaggcgttcctctgcagacgtacctgcccgacgtcaaagagctgctggagctggac
gagctgagctctctgaagtccaaaccctactttgagttcgttcttcgagcaaattatgaa
cattacctggaggctcagatgtga
DBGET
integrated database retrieval system
