Pseudochaenichthys georgianus (South Georgia icefish): 117441078
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Entry
117441078 CDS
T09629
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117441078
Pattern recognition receptors [BR:
pgeo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117441078
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
LRR_6
LRR_4
AAA_16
Motif
Other DBs
NCBI-GeneID:
117441078
NCBI-ProteinID:
XP_033933167
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MEKSESLHKIYTEIYITRGDTTEVNKEHEIRQIEQAFSKPDGSETPIRQEDLFKGSTERG
KPIRAVLTKGVAGIGKTVLTQKFTLDWAEGKAHQDIQFIFPFTFRELNVVSDEKYSLVEL
VHLFFPETRDAGICRFDQFPVVFIFDGLDECRLPLDFLNTKILTDITKSTSVDRLLTNLI
RGKLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDPEQADTIIS
HIKTSRSLHIMCHIPVFCWISASVLEDMLKTEGGELPKTLTEMYVHFLVIQSKVNVKYDE
GAETDPHRSPECRMKMMESLGTLAFEQLLKGNLIFYKSNLTECGIDIRAASVYSGVFTQV
FREVRGTYKDKVFCFVHLSVQEFLAALHVHLTFINSGVNLMAPWWSKVFRQKPKHVYQNA
VDQALQSPNGHLDLFLRFLLGLSLETNQTLLHNLLTPQTGSGSQTIQKTVKYIKKKIRKN
PSPEKSINLFHCLNEMNDRSLVEEIQRYLRSGSLSTEELSAAQWSALVFILLSSQEDLDV
FDLKKYSASEEALLRLLPVVKASNKALLSDCNLSERSCAALSSVLSSQSSSLRELDLSHN
DLPDSGVKLLSAGLESPHCELETLRVTGCKLSERSCAALSSVLSSQSSSLRELDLSNNDL
QDSGMKLLSAGLESPHCELETLRVTGCNLSERSCAALSSVLSSPSSSLGDLDLSNNDLPD
SGVKLLSAGLESPHCELETLRVSSCHLSFHYALKILT
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatctgaatccctacataaaatctacacggagatctacatcaccaggggagac
accacagaggtcaacaaggaacatgagatcagacagatcgaacaagcattcagtaaacca
gacggatcagaaacacccatcagacaagaagacctctttaaaggctcaactgaaagaggt
aaaccaatcagagcagtgctgacaaagggcgtggctggcattgggaaaacagtcttaaca
cagaagttcactctggactgggctgaaggcaaagcccaccaggacatccagttcatattt
ccattcaccttcagagagctgaatgtggtgagtgatgaaaagtacagcttggtggaactt
gttcatctcttcttccctgaaaccagagacgcaggaatctgcaggttcgatcagttcccg
gtcgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttcctcaacact
aagatcctgactgatatcacaaagtccacctcagtggatcggctgctgacaaacctcatc
agggggaagctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaat
cagatccctcctgagtgtgtggacatggtgacagaggtccgagggttcactgacccacag
aaggaggagtacttcaggaagagattcagagatccggagcaggccgacaccatcatctcc
cacatcaagacctcacgaagcctccacatcatgtgccacatcccagtcttctgctggatc
tctgcttcagttctggaggacatgttgaaaactgagggaggagagctgcccaagaccctg
actgagatgtacgtccacttcctggtgattcaatctaaagtgaacgtcaagtatgatgaa
ggagctgagacagatccacacaggagtccagagtgcaggatgaagatgatggagtctctg
ggaacactggcttttgagcagctgctgaaaggcaacctgatcttctataagtccaacctg
acagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacaggtc
tttagagaggtgagaggaacgtacaaggacaaggtgttctgcttcgtccatctgagcgtt
caggagtttctggccgctcttcatgtccatctgaccttcatcaactctggagtcaacctc
atggccccctggtggtctaaagtcttcagacaaaaacctaaacatgtttaccagaatgct
gtggaccaggccttacagagtccaaacggacacctggacttgttcctccgcttcctcctg
ggtctttcactggagacaaatcagaccttattacacaaccttctgacaccacagacagga
agtggctcacagaccatccagaaaacagtgaaatacatcaagaaaaagataagaaagaac
ccgtctccggagaaaagcatcaacctgttccactgtctgaatgaaatgaatgatcgttct
ctagtggaggagatccaacggtacctgagatcaggaagtctctccacagaggaactgtct
gctgctcagtggtcagctctggtcttcatcttactgtcatcacaagaagatctggacgtg
tttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtc
aaagcctccaacaaagctctgctgagtgactgcaacctgtcagagagaagctgtgcagct
ctgtcctcagtcctcagctcccagtcctctagtctgagagagctggacctgagtcacaac
gacctgccggattcaggagtgaagctgctgtctgctggactggagagtccgcactgtgaa
ctggagactctcagggtaactggctgcaagctgtcagagagaagctgtgcagctctgtcc
tcagtcctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgacctg
caggactcaggaatgaagctgctgtctgctggactggagagtccgcactgtgaactggag
actctcagggtaactggttgcaacctgtcagagagaagctgtgcagctctgtcctcagtc
ctcagctccccgtcctctagtctgggagatctggacctgagtaacaacgacctgccggac
tcaggagtgaagctgctgtctgctggactggagagtccgcactgtgaactggagactctc
agagtttcgtcttgccatctttcttttcattatgcactaaagattctaaca
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