Pseudochaenichthys georgianus (South Georgia icefish): 117441087
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Entry
117441087 CDS
T09629
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
pgeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117441087
03015 mRNA surveillance pathway
117441087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117441087
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117441087
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117441087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPP1_GP23-1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117441087
NCBI-ProteinID:
XP_033933176
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSGDSWAVSVDVQEASTACSQLDFLKKVDPCLPAGIRGTDINGNIEPQTDVSLGGGPPSD
LAEQSLLNKLIRRSLVRNRNQVEVLQRDPSSPLFSVKTFEELRLKPELLRGVYCLGFNRP
SRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPENHWTQCLCIAPTYELA
LQIGQVMEQMGKFCPEVTLTYAVRGNRMERGVRLQQHVVIGTPGTLLDWCSKYRIIDPKL
ISMFVLDEADVMIATQGHRDQSIRIHRLLPKECQMLLFSATFEDSVWGFAEKVVPDPNII
RLRREEETLDTIKQFYILCSEEEEKFSALCDLYGGLTVAQAMIFCRTRNTASWLAGRLTE
EGHQVALLSGELTVEQRADVIQRFRTGKEKVLVTTNVCSRGIDVEQVTLVVNFDLPVDME
GNADNETYLHRIGRTGRFGRRGFAVNMVDSDHSMELIRQIERHFNRSISRLDPGSLQEME
RLIS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagactcctgggctgtgtctgtggacgtgcaggaggcgtcaactgcctgctca
cagttggacttcctaaagaaagtggacccgtgtcttcctgctgggatcagagggacagac
atcaatggcaacatcgagccgcagacggatgtctctctgggggggggtcctccttcagac
ctggcggagcagtctctgctcaacaagctgatccggaggtctctggtgaggaacaggaac
caggtggaggttctgcagagggaccccagctcccccctgttctctgtgaagaccttcgag
gagctgcgtctgaagccagagctgctgcgaggtgtttactgtctcggcttcaaccgcccg
tctcgcatccaggagaacgctctgcccatgatgctggcccagcctcctcagaacctcatc
gctcagtctcagtcaggaacaggaaagactgcagcgttctctctcgccatgctgagccac
gtgaatccagagaaccactggactcagtgcctgtgcatcgcccccacctacgagctggct
ctgcagatcggtcaggtgatggagcagatggggaagttctgtcctgaggtcacgctgacc
tacgctgtgagggggaaccgcatggagaggggggtgcgcctgcagcagcacgtggtcatc
gggacccccggcaccctgctggactggtgcagtaaatacagaatcatcgatcccaaactc
atctccatgttcgtgttggacgaggcggacgtgatgatcgcaacgcagggccatcgagac
cagagcatcaggatacacaggctgcttccaaaggagtgccagatgctgctgttctcggcc
accttcgaggactcggtgtggggctttgcagagaaagtagtccctgatccaaacatcatc
cgcctgaggagagaggaggagacgctggacaccatcaagcagttctacatcctctgcagc
gaggaggaagagaagttctctgctctgtgcgacctgtacggagggctgaccgtcgctcag
gccatgatcttctgccgtacccgcaacacggcctcctggctggcagggcgcctgacggag
gagggccaccaggtggcgctgctgagcggagagttgacggtggagcagagagcggacgtc
atccagcgcttcaggaccggcaaggagaaggttctggtgacgactaacgtgtgctccaga
ggtatagacgtggagcaggtgaccctggtggtgaacttcgacctcccggtggacatggag
ggtaatgcagacaacgagacgtatctccaccggatcggacgcaccgggcgcttcgggcgc
cgaggcttcgccgtcaacatggtggacagcgatcacagcatggagctcatccggcagatc
gagaggcacttcaaccgcagcatcagccggctggacccgggcagcctgcaggagatggag
cggctcatcagctga
DBGET
integrated database retrieval system
