Pseudochaenichthys georgianus (South Georgia icefish): 117441101
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Entry
117441101 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3A-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117441101
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117441101
04082 Neuroactive ligand signaling
117441101
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117441101
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
117441101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117441101
NCBI-ProteinID:
XP_033933193
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
NRFHLQMAMAVPESALSALLLTVLHRSGWREGTVVLCQGWEEAGGLLRILDGGSSASWDG
GGVSEVSWQVRALLNLTQLAHDDTQIHDFLSKHFKHNRSSAAVLLFGSDPQCTAAVLRGA
QDLGLTLPIMQWVLGQPLSPEALQNIGLPLGLLAYGPVEQNPLEFYVRDALQLVRRAIAA
AVLLRPDQALIQNHVNCFDHKEALETSGPYLSSFLSNTSFTGLTGPVRVLQNQVLTDQRF
HVWSLRRDAVGQPAWVTVGRWEGGRLQVEEQGAWQGPRPPPRPEGGGARTQRTPWKPGLP
VSGTRVRVVTLVEHPFVFTRDVDDEGSCPAGQFCLDAGTNSSEVLERIFREVAGGNSSFL
PAGFGRCCYGYCIDLLEKLAEDLDFQFDLYVVGDGKYGAWKGGRWTGLVGDLMHGLADMA
ATSFSINSARSRVIDFTSPFFSTSLGILVRSKDTAAPMGAFMWPLHWSMWVGIFVALHIT
ALFLTLYEWKSPYGMTPHGRNRIRVFSYSSALNLCYAILFGRTVSSKPPKCWTSRFLMNL
WAIFCLLVLSSYTANLAAVMVGEKTFEEVSGIHDAKLHHPSRGFRFGTVRESSAEDYMKK
SFPEMHEYMRRFNEPTTPEGVGNL
NT seq
1874 nt
NT seq
+upstream
nt +downstream
nt
aaccggttccacctccagatggcgatggcggtcccagagtccgctctctccgccctgctg
ctgacggttctccatcggtctggttggagggagggaaccgtagttctgtgtcagggctgg
gaggaggcgggggggctcctgaggatcctggacgggggaagcagtgcatcatgggacggc
gggggggtgtcagaggtcagctggcaggtccgagctcttctcaatctgacccagttagct
cacgacgacactcagatccacgacttcttatcaaagcacttcaaacacaaccgttcctct
gcggcggttcttctgtttggttccgacccacagtgcacggcggcggttctgcgcggcgct
caggacctgggcctcacattacccataatgcaatgggtgttgggtcagcctctcagccct
gaggctctgcagaacatcgggctgcctctgggtctgctggcgtacggcccggtggagcag
aacccgctcgagttctatgtccgagacgccctgcagctcgttcgacgcgccatcgccgcc
gcagttctgctgagacccgaccaggctttgatccagaaccacgtcaactgctttgaccac
aaggaggcgctggagacctcagggccgtacctgtccagcttcctctccaacacgtccttc
accggtctgacgggcccggtccgggtccttcagaaccaggtgctcacggatcagcggttc
cacgtctggagcctccggagggacgcagtggggcagccggcctgggtgacggtgggccgc
tgggaggggggtcgtctccaggtggaggagcagggcgcctggcagggacccagacccccc
cccagacctgagggagggggcgccagaacacagagaaccccctggaaacccgggttacca
gtatccggtaccagagtccgggtggtgacgctggtggagcatcccttcgtgttcacgcgg
gatgtggacgacgaggggagctgtccggcgggtcagttctgtttggacgcggggacaaac
agctctgaggttctggagcggatcttcagggaggttgcaggaggaaacagcagcttttta
cccgctggattcgggcgatgctgctacggttactgcatcgacttgttggagaaacttgcc
gaggatttggacttccagtttgacttgtacgtcgtcggagatggaaaatacggcgcgtgg
aaaggaggtcgctggacggggctggttggcgatctgatgcatggtttggcagatatggcc
gccacttcttttagcatcaactcagctcgtagtcgcgtcatcgacttcacctcgcccttc
ttctccaccagcctgggcatcctggtgcgcagtaaagacacagcggcacccatgggggcc
ttcatgtggcccttgcactggtccatgtgggtggggatcttcgtggcgctgcacatcaca
gcgctgttcctcacgctgtacgagtggaagagtccgtatgggatgacgcctcacgggagg
aacagaatccgagtgttctcgtactcgtcggcgctgaacctgtgctacgccatcctgttc
ggacgcaccgtgtcctccaagccgccgaagtgctggacgagtcgattcctgatgaacctg
tgggccatcttctgcctgctggtgctgtccagctacacggcgaacctggccgccgtcatg
gtgggagagaagaccttcgaggaggtgtcggggatccacgacgccaagctgcaccatccg
tctcgggggtttcgctttgggacggtgagggagagcagcgccgaggattacatgaagaag
agttttccagaaatgcacgagtacatgagacgcttcaacgagccgacgacgcctgagggg
gtcggcaatctcaa
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