Pseudochaenichthys georgianus (South Georgia icefish): 117441103
Help
Entry
117441103 CDS
T09629
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
pgeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117441103 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117441103 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117441103 (tnpo3)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
117441103 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
117441103
NCBI-ProteinID:
XP_033933195
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MEGKPNLTLVFQAVQALYHDPDPAGKERASVWLGELQRSMYAWEIADQLLQLKQDVESCY
FAAQTMKMKIQTSFYELPPETHNALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMAS
WKGCVHTLIEKYNNDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVV
TLLTSCVEKAGTEEKMLIKVFRCLGSWFNLGVLDSNFMAGNQLLMVLFQVLQRDETSTNL
HEAASDCVCSALYAIENVDTNMGLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTE
LCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAAL
HTIFRPYIQRLLHCLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFS
QLYSTLKEGNPSWEVTEAVLFIMAAIAKSVDPENNPTLAEVLQQVVLLPETVHIAVRFTS
IELVGEMSEVVDRNPRFLDPVLNYLMKGLREQPLASAAAKSIHNICSVCRDHMAQHFQGL
LDIARALDTFALSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVLALKKLLSEEST
NGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSDTLNTHQADNRIVER
CCRCLRFAVRCVGKGSANLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQGL
LDMLQALCMPTFQLLEMQNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSSIIVHIIQCAV
AAASLDHRDANCSVMKFMRDLIHTGVSNDHEEDFELRKQLIGQAMGQHGQQLITQLMTSC
CFCLPPYTLPDVAEVLWEVMLFDRPTFCRWLENALKALPKETSGGAVTVTHKQLTDFHKQ
VTSAEECKQVCWAIREFTRLYR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaagcccaacctgaccctggtattccaggcggtgcaggccctgtaccacgac
ccggacccggcggggaaagagagggcctccgtgtggctgggggagctgcagagatcgatg
tacgcctgggagatcgcggaccagttgctgcagctgaagcaggatgtggagtcttgttac
ttcgctgctcagaccatgaagatgaagatccagacgtccttctacgagctcccccccgag
acccacaatgcactgcgagactctctgctgacccacatccagaacctcaaagacctgtcg
cccatcatcgtcacacagctggctctcgctatagcagacctggctctccagatggcctcc
tggaaggggtgtgttcacacactcatagaaaagtacaacaatgacatcagctcgatgccc
ttcctcatagagatcctcaccgttctgccggaggaggtccacagccgctctctgaggatc
ggagccaaccggaggacggaaatcatcgaagacctggcgtactactccagcaccgtggtc
acgctgctgacttcctgtgtggagaaggcgggcacggaggagaagatgctgattaaagtg
tttcgctgtctggggagctggttcaacctgggagtcctggacagcaatttcatggccggg
aaccagctgctcatggtcctcttccaagtcctgcagagggatgaaacctccacaaacctc
cacgaggcggcgtctgactgcgtctgctcggcgctgtacgccatcgagaacgtggacacc
aacatgggtctggccctgcagctcttccagggcgtcctgacgctagagacggcgtaccac
atggcggtggctcgggaagacctggacaaagtcctgaactactgccggatcttcaccgag
ctctgcgagaccttcctggagaccacagtccggagtccgggccaggggatgggagacctg
cggaccctggagctgctgctgatctgtgcaggacacccgcaatacgaggtggtggagatc
tcctttaacttctggtaccgactcggagaacatctgtataaaataaacgatgccgctctt
cacaccatcttcagaccgtacatccagagacttctgcactgtttggcccgacactgtcag
ctggacccagaccacgaggggatcccggaggatacggatgattttggagagttcaggatg
agagtctctgacctcgtcaaagacgtcatttttctggttggatccatggagtgtttctct
cagttgtattcgacattaaaagaagggaacccgtcctgggaggtgacagaggccgttctg
ttcatcatggctgctattgctaagagcgttgatccagaaaacaaccccacgctcgccgag
gttttgcagcaggtggtcttacttcctgagacggtacacatagcagtccgattcacgagc
attgagctggtgggagagatgagcgaagtggtcgacagaaaccccaggttcctcgacccc
gtcctgaactacctgatgaaaggactcagggaacagcctctggcgtcggcggcggcgaag
tcgatccacaacatttgctcggtgtgcagagaccacatggcccaacacttccagggactg
ctggacatcgcccgggcccttgacaccttcgccctatccaccgaggctgccgtaggactg
ctcaaaggtacggctctggtcttggctcgtcttcccttggagaagatcgcagagtgtctc
tctgacctctgtgctgttcaggtgttggctcttaaaaagcttttgtctgaagaatctact
aacggtaaatcagctgaccccaccgtgtggctcgacagactggcagttatcttcagacac
acaaaccccatcgtagagaatggacagactcatccctgtcagaaagtcattcaggagatc
tggcctgtgctgtcagacactctgaacactcatcaggctgataacaggatcgtggagcgc
tgctgtcgctgtctcaggttcgctgtgaggtgtgtcggcaagggatccgccaacctgctg
cagccactcgtcacgcagatggtgagtgtgtaccaggtgtatccacactcctgcttcctg
tacctggggagcattctggtggacgagtacggaatggaggagggctgtaggcagggcctg
ctcgacatgctacaggctctgtgcatgccgaccttccagctgctggagatgcagaacggt
ctgaggaaccatccggacaccgtggacgacctgttcagactggccaccaggtttgtgcag
aggagtccggtcacgttgctcagcagcagcatcatcgttcacatcatccagtgcgccgtg
gcagcagcgtctctggaccaccgcgacgcaaactgcagcgtcatgaagttcatgagagac
ctgatccacacgggcgtctccaacgatcacgaggaggactttgagctgaggaagcagctg
attggccaggccatggggcagcacggccagcagctgatcacccagctgatgacttcctgc
tgtttctgcctccccccctataccctgcccgacgtggccgaggtgctgtgggaggtgatg
ctgttcgaccgtccgacgttctgccgctggttagaaaacgctctgaaggcgttgcctaag
gagacgtcggggggggcagtgactgtcactcacaagcagctgactgacttccacaagcag
gtcaccagtgcggaggagtgtaaacaggtgtgctgggccatcagagagttcaccagactg
taccgatag
DBGET
integrated database retrieval system
