Pseudochaenichthys georgianus (South Georgia icefish): 117441107
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Entry
117441107 CDS
T09629
Symbol
cyld
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04217
Necroptosis
pgeo04622
RIG-I-like receptor signaling pathway
pgeo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117441107 (cyld)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117441107 (cyld)
04625 C-type lectin receptor signaling pathway
117441107 (cyld)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117441107 (cyld)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117441107 (cyld)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117441107 (cyld)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C67
117441107 (cyld)
Ubiquitin system [BR:
pgeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117441107 (cyld)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
117441107
NCBI-ProteinID:
XP_033933202
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All DBs
Position
3:complement(49142787..49183195)
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AA seq
956 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVIKECTVEKTPQKTLRIPRGSLGQACQERNSLGRTLP
PNKGKKSLRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKSRLERVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDEALGELEVDHVHLVEDDQDFPPLEINSRVLVQTR
DGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICD
VMPDYSMQDQRLQKHSFAPRGTNSEKSSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEVGEDPAKSLTDTPPRLQPVPPPSRAPPPATLSTDNKFHSLPFSL
NRKTGPIDSMSHGPLSLSVQSVMGEQPEPPSPAAPPSPRPSTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLRLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKSHRHGKLSV
PKELQEGSGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSSWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMSPEELHSLDPKSIVGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgccctgtggagccaggagaagcccagcgggggcttcagggaggactggcgc
ttctacatggtcatcaaggagtgtacggtggagaagaccccccagaagaccctgaggatc
ccccgcggcagcctcggccaggcctgccaggagcgcaacagcctggggagaacgctgcct
ccaaacaagggcaagaaaagtctccgcatcctggaccagaccaacgtggtgctgagcctg
gacgagcgggacgtcctggagctggacgagaagctggcagagctgctgttccccatcaca
aactgcgaggagcgctacgccctgctctgcaacaagtcccggctggagcgagtgcgtgat
attgactgtgggtccaaggtgagggtccagctgcgctcgggggacgaacctctgcccggg
gtggtccgcttcaaaggctcgctgctgcccgacagagcgctctctggaatctggttcgga
gtagagctgctggaggagggccggggccagggcttcaccgagggatcctaccagggacgc
caactcttccgctgtgaggatgagtgcggtgtgtttgtggccctggacaagcttgaactc
tgggaggatgacgatgacgaagctttgggtgagctggaggtggaccacgtgcatctggtg
gaagacgaccaggacttccctcctctggagatcaactccagggtcctggtgcagacccgg
gacgggccggagagagggaccatcatcttctgtgacctgctgcccgggaatgagagcctg
ggctactatgtgggagtagacatggacaatcccatcggggactgggatggtgtgatcgat
gggaagctgctgtgtaattttgccagtttggagcacactcgactcgtacctatctgtgac
gtaatgccagattattccatgcaggaccaaaggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgaaaagtcgtcctctggccaaagcaaaccaaagagcaaaggattaggt
catcagtgtggcagtagaagcaagtctgagttttactatactttaaatggcagctctgtt
gacccccctgcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggac
cccgccaagtcgctcactgacacccccccccgacttcaaccagtcccccctccctcccga
gccccaccccccgccacgctgtccactgacaacaagttccactcgctccccttcagcctg
aaccgtaagacgggccccatcgacagcatgagccacggccccctgtcgctgtccgtgcag
tcggtgatgggggagcagcccgagcccccgtcgcccgccgcccccccgtcgccgaggcct
tcgacgcccccccgaggacagcccggtctggaggtgggctctctggtggaggtgaaggag
aacccccctctgtgcggggtcatccgctgggtgggcctcccccccggcctgctggagccg
ctcgctgggctggagctggaggaggagtgtcccggttgcactgacggcacgttcaaaggc
acgcggtacttcacctgccctcccaaaaaagctctgtttgtgaagctcaagtgctgccgg
cccgactcccgcttcccgtccctgcatcactcctccaaccccatcgagcgctgcaactcc
atcgcattcggggggtacctcagtgaagtagtgcacgagaacacgcctccacgcacagag
aacgacggtctggatgtcatggtggggaaaaagaaaggcatccagggccactacaactcc
tgctacctggactcaacactcttctgtctgttctccttcagctccgttctggacacggtt
ctcctgaggccgcgatctaaaaccgatgtggaatattaccgagagacccaagagctgctg
cgcacagagatcgtgaacccgctgcgcatacatgggtatgtgtgtgccacgaaggtgatg
aagctgaggaggatcctggagaaagtagaagctgcttctgggtttacatctgaagaaaaa
gatcctgaggagttcctcaatatccttttccatcacatactgagggtggacccgctgctc
aggctaaggtcagccgggcagaaggtgcaggactgttacttctatcagatctttatggac
aagaaggacaaagtgggagttcccacaatccagcagctgctcgagtggtccttcatcaac
agcgacctcaagtttgcagaggccccctcctgccttatcatccagatgcctcgctttggc
aaagacttcaaaatgttcaacaagattttcccgtctctcgagttggacatcacagacctt
cttgaagacactccgagggaatgtcgaatctgcggaggcctggctctgtacgagtgtcga
gactgttatgaggacggggacatcacggcaggaaagattaaacagttctgtgaaaagtgc
aatacgcaggtccatctccacccgaggaggaaatcccaccggcacgggaagctgtccgtc
cccaaggagctgcaggagggctcggggcggcagggctcgttcccccgccagaggatggag
ctgttcgcagtgctgtgcatcgagaccagtcactacgtggccttcgtcaagtacggcagc
gcggactcctcctggctcttctttgacagcatggcggaccgcgacggagggcagaacggc
ttcaacatcccgcaggtgtccccctgccccgaggtggaggcgtacctgaagatgagcccc
gaggagctgcactccctggaccccaagagcatcgtgggccaggcccgccgcctgctctgc
gacgcctacatgtgcatgtaccagagccccaccatgagcctgtacaagtag
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