Pseudochaenichthys georgianus (South Georgia icefish): 117441203
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Entry
117441203 CDS
T09629
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117441203 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117441203 (nup98)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117441203 (nup98)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117441203 (nup98)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117441203 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
TFIIA
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
117441203
NCBI-ProteinID:
XP_033933299
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGAASTFGQQNAGFGTTGGFGTSAFGAAANTGGLFGPAQAKPAG
GLFGASTFSQPPASSAATGFGFGAAAAGGTATSLFGNTATGTTGGLFSQPSNAFGASKPT
SFGKVSLPSCPPGFGTSAASGGLFGSTAAAAASNPFGGSAVSSLFGGAGFTAAQQQQQPG
TTVKFNPPTGTDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRFEDYSAGRKGPSNPM
AAPTGGLFGTPAAAAPSAATGLFGAAAANTNFSFGQNKSTFGATPAAGGFGATAGGLFGQ
QQQQAAQQQQQQQQQQQQQQQAQQAAAASSLFKPFGATTTTQSSGFSFGNTNTMGQANTS
SIGLFGNTAAPQPTGLFGAAQPSAAATGFGAATGLFGQTNTGFGNVGTQSLFGNKTAGFG
ATTTSAPSFGTGTGLFGNKPALTLGAGTNTSTFGFGANPAAGGLFGSKPATGGLGAALGT
SFGAAVPGQTSLFGNTQGKLGTTLGTMGAFGASAFNTGATSMGFGAPQQAVALTDPSGAA
AQHALLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQKALTTPTHYKLTPR
PATRVRPKALGSSGASKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVLKNLNSSQYSSPLS
KEIDDLASPPEYPHNGHSSHVEDEEEMAGLSSRTEEDPEVSQFYVNPISKPVAFSPPAVL
QDTISELNMHKAARNGLEVSSDDISASLCEESLQEEQEEEQLEQQPPHPAGIVLNRVGYY
TIPSMEDLAEMVDGNGDCLVENFTVGRKGYGSIFFPGEVNAAGLNLDDIVHFRRKEVIVY
PDDKNKPAEGEGLNRKAEVTLDGVWPNDKTSCAQIRSPERLAEMNYEGRLEKASRRQGAR
FLEYRTETGSWVFEVAHFSKYGLQDSDEEEEVPLKSDPKKLKTMSLPTSRLQKLLPPAQQ
QVEQPAFITHHHHHPHHH
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcttttggtactcccttcgggggagggacggggggcttcggcgccgct
tccaccttcggacagcaaaacgcgggttttgggacgacgggaggctttgggacgtcagcg
ttcggggcggccgccaacactggaggactgttcggtcccgctcaggctaaacctgcaggt
ggtctttttggagctagcaccttcagccagcctccggcctcctccgccgccacgggcttc
gggttcggagcagcggccgccggcggcaccgccacgagcctgttcggaaacaccgccaca
gggaccaccggaggactcttctctcagccgagcaatgccttcggagccagcaaacctacc
tcgttcggaaaagtctccctcccatcgtgtcctccaggcttcgggaccagcgccgccagc
ggagggctgttcgggtccacagccgccgccgccgcctccaatcccttcggagggagcgcc
gtgtcctctctgttcgggggggcgggcttcacggccgctcagcagcagcagcagccggga
accaccgtcaagttcaaccctccgacaggaactgacacgatggtgaaggccggcgtgacg
acgagcatcaacaccaagcaccagtgcatcacggccatgaaggagtacgagaacaaatcc
ctggaggagctgcgcttcgaggactactcggcgggcaggaagggacccagcaacccgatg
gcagcgccgacgggcggtttgttcgggacgccggccgccgccgcgcccagcgccgccacc
gggctgttcggagccgccgccgccaacacgaacttctccttcggacagaacaagagcacc
ttcggggccacaccggctgccggggggttcggagcgacggccggcggtctgttcgggcag
cagcagcagcaggcggcgcagcagcaacaacaacaacaacaacaacagcagcagcagcag
caggcgcagcaggcggcagcggccagtagcctcttcaaacccttcggagcgaccaccacc
acccagagctccggattctccttcgggaacaccaacaccatgggccaggccaacaccagc
agcatcggtctctttgggaacacggcggctcctcagcccaccggcttgttcggcgccgct
cagcccagcgccgcggccaccggcttcggggcggccaccggactcttcggacaaaccaac
accgggttcgggaacgtcggcacacagagtttatttggtaataagacggcagggttcggg
gccaccaccaccagcgctccgtccttcggcaccggcaccgggctgttcggaaacaagcca
gctctcacactgggggcgggaaccaacacctccaccttcgggttcggtgccaacccggct
gctgggggtctgtttgggagcaagccggccaccggaggactgggagctgctctgggaacc
agcttcggagcagcagtgccaggacagacgtctctgttcgggaacactcagggtaaactg
ggcaccactctgggaacgatgggagcgttcggagcgtcggcgttcaacaccggagcgact
tcgatgggcttcggagcgccgcagcaggccgtcgcgctgacggaccccagcggcgcggcg
gcccagcatgcattgctgcagcagcagctcagtgttctggcatattctccgtacggagac
tctcctctgttcagaaacccgctgtcggaccccaagaagaaggaggagcgtctgaaaccg
accaatcccacggcccagaaggctctgaccacgcccactcactacaagctcaccccccgt
ccggcgacacgcgtccggcccaaagctttgggttcttcgggggcttcaaagtctcagctg
ttcgacgggctggacgacgacgagccgtcgctcacaaacggggcgttcgttccccggaag
agcatcaagaagctggtcctgaagaacctgaacagcagtcagtacagcagccctctgagc
aaggagatcgacgacctggcctcgccccccgagtaccctcacaacgggcacagcagccat
gtggaggacgaggaggagatggcgggcctcagcagtcgaacagaagaggatccagaagtg
tctcagttctacgtgaacccgatctctaagccggtcgctttcagcccccccgcggtgctg
caggacaccatcagcgagctcaacatgcacaaagccgcgcgcaacggcctggaggtgagc
agcgatgatatctcagcgtctctgtgtgaggagtctctgcaggaggaacaagaggaagag
cagctcgagcagcagcctcctcacccggcaggcatcgttctgaaccgcgttggttactac
accatcccctccatggaggacctggctgagatggtggatggaaacggagactgcttggtg
gagaacttcaccgtgggaaggaaaggctacggctccatcttcttccccggagaggtgaac
gctgcggggctgaacctggacgacatcgtgcacttcagacgcaaagaggtcatcgtttac
cccgacgacaagaacaagcccgcggagggggaggggcttaacaggaaggcggaggtgact
ctggacggcgtctggcccaacgataagacgtcgtgcgctcagatccgcagcccggagcgt
ctggcggagatgaactacgagggccggctggagaaggcctcgcgcaggcagggggcccgc
ttcctggagtacaggacggagaccggctcctgggtgttcgaggtcgcccacttctcaaag
tacggcctgcaggactctgacgaagaggaggaagtgccgctcaaatctgaccccaagaag
ctgaagacgatgtcacttcctacctcgcgtctgcagaagctgctcccccccgcccagcag
caggtagagcagcctgccttcatcactcaccaccaccatcatcctcatcatcactga
DBGET
integrated database retrieval system
