Pseudochaenichthys georgianus (South Georgia icefish): 117441229
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Entry
117441229 CDS
T09629
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04382
Cornified envelope formation
pgeo04510
Focal adhesion
pgeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117441229 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117441229 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117441229 (lamc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
Baculo_PEP_C
Alph_Pro_TM
DegS
Motif
Other DBs
NCBI-GeneID:
117441229
NCBI-ProteinID:
XP_033933318
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MRTSWISVCGLLAAVCAVQATHTFYSTVRCDCNGRSRYCLRDAGGLHCVDCQGHFEGRHC
ERCKDGFHQQGALPSCTPCRCNPTGAVSTTCDSRGRCSCKDGVTGDKCDRCPDGPIGATG
CKQSRQPRQDSGNCFCYGHSSRCSAKTGYSVHNITSTFASGPDGWRAATARGDTPPDVHF
RWSPKHQDLEVISKNSLPVYLYAPAHYLGNRLLSYGQNFSFSLRLDRGVRHPSVSDVILE
GNGLKVTASLGELRSIVPCGQKVHYSFRLDEQPGSPWMPQISSAQFHSLLQNLTAIKIKV
TFGENGRGYLNNVRLVSARRGAGPPAGWVQTCSCPTGYNGDFCDGCSAGFRRSAPTDGAF
SPCEPCSCRGGSCDPLTGDCYSGDQSSGDCTAGSYRDPWPPRACVKCPCPEGRSCSLAAG
SLDPRCDRCPAGTTGGDCNVCQEGFYGGAARGDGVSTCRPCQCNGHIDVSVAGSCDRGSG
ECLKCVNNTKGPSCESCLRGFYHSRAADACKACDCSLLGSELGQCDDAGRCRCRPGFEGL
KCQRSNCPACFTPIKRKMQAYAAKLAELERLFSEMDAGLKPANKAEMEAALNAVEELVDD
LQYETEGLTVEEKKLQVRLAAISRSQLDEEQEIQNVADAAVDIKQQERTYSAKVKEVQAL
MDDMKRKLDKAKADLRSADIPQGDAPLGTTLLSSLVPTALSLADKHQTTAASVERTASEA
LTASKKSLALVRDLMTRENKVQELIGDMKTMHDKTSAQVKSLENQGVRLGVQAKDESKTS
DGMLKDIANMERSIPADLKEQVDAMVSRLDDVKVEVDGHISGLDMLQDTVQRDKTATEDL
LAQGKAAKKEFNKLVDRVDVAKVLTEDALKGINGNTKELEDALNALKGFDQQIGDSKSLA
DDAIKRLPGIKATIQQAVSDNAETGGILGDVSADYDSSVKSANLLGKLVAGLESTLRSLP
PHSGLLSQATKLNKGSKDLKQRTLDATDNLTAELEGGRTLEGEAEQAADAATAALNNARN
TRDGVGKTLRDINALLATMDQSTPVDETQLRALEVALDGAQQEVQGRLRPRLRDMEAGEE
AYRRRLSGINRDIGSILKDIANLEDILAAVPSGCYNSPPIEEA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccagctggatctcagtgtgcggactactggctgcagtgtgtgccgtgcaggcc
acacacacattttactcgacagtgcgctgcgactgtaatggccgctccaggtactgcctg
cgagacgccggggggctgcactgcgtcgactgccagggacattttgagggtcgtcactgc
gagcgctgcaaggacggcttccaccagcagggggcgctgccgagctgcacgccctgccgc
tgcaaccccacaggtgctgtcagtaccacgtgtgacagcagggggcgctgcagctgcaaa
gacggcgtcacgggagacaaatgtgaccgctgcccggatggaccaatcggagccaccggc
tgcaagcagagccgtcagcccagacaggattctgggaattgtttctgttacggtcacagt
agccgctgctctgcaaagaccggatactccgtccacaacatcacctccaccttcgccagc
ggtccggacggttggagagcagcgacggctcgaggcgacacgccccctgacgttcacttc
cgctggtctcctaaacaccaggacctggaggtgatctccaagaacagcctgccggtctac
ctgtacgctccagctcattacctggggaaccggctgctgagctacggtcagaacttctcc
ttctcgttgcgtctggaccgaggcgtccgtcacccgtccgtcagcgatgtgattctggag
ggaaacggcctcaaagtgacggcttctctgggagagctgaggtccatcgtgccctgcgga
cagaaggtccactacagcttcagactggacgagcagcccggcagcccctggatgcctcag
atctcctccgctcagttccactcgctcctccagaacctcaccgccatcaagatcaaggtc
acgttcggagagaatgggcgcggctacctgaacaacgtgcgcctggtatcagctcgtcgg
ggcgctggtccccctgctggctgggtccagacctgcagctgtccgaccgggtacaacggg
gacttctgcgatggatgctctgcggggttcagacgcagcgcccccacagacggagccttc
agcccctgcgagccctgcagctgccggggggggagctgcgacccgctcaccggggactgc
tactccggggaccagtcgtccggggactgcacggccgggtcctaccgagacccgtggccc
ccgagagcctgcgtgaagtgcccctgtccggagggaaggtcctgctcgctggctgccggg
tctctggacccccgctgtgaccgctgccccgcaggaaccacaggtggtgactgcaacgtc
tgtcaggaggggttctatggcggcgctgctcggggggacggcgtgtcgacctgcagaccc
tgccagtgtaacggacacatcgacgtcagcgtggcggggagctgcgatcgaggcagcgga
gagtgtctgaagtgtgtgaacaacaccaagggtccgagctgcgagtcctgtctgcgaggg
ttctaccacagccgggccgccgacgcctgcaaggcctgtgactgcagtcttctgggctct
gagctcggacagtgtgatgatgcgggtcgctgccggtgccggccaggcttcgagggtctg
aagtgccagaggtccaactgccccgcctgtttcacccccatcaagagaaagatgcaggcc
tacgctgccaagttggccgagctggagcgtctgttctcagagatggacgcaggtttgaaa
cccgccaacaaggcagagatggaggcggctctgaacgctgtggaggagctggtggacgac
ctgcagtacgagaccgaggggctcacagtggaggagaagaagctgcaggtacgtctggcg
gccatcagcaggagtcagctggacgaggagcaggagatccaaaacgtggccgacgcagcg
gtcgacatcaaacaacaggaacggacgtacagcgccaaggtgaaggaggtccaggctctg
atggacgacatgaagaggaaactggacaaagccaaggccgacctcagatcagccgacatc
cctcagggagacgctcctctggggacgaccctcctctcctctctggtgcccacggccctc
agtctggctgataaacaccagacgacggctgcctctgtggagcggaccgccagcgaagct
ctgacagcctcgaagaagagtctggctctggtccgggatctcatgaccagagagaacaaa
gtccaagagctgatcggagacatgaagaccatgcacgataagacctcggcccaggtgaag
agtttggagaaccagggggtccgtctgggcgtccaggccaaagacgagagcaaaacgtcc
gacggcatgttgaaggacatcgccaacatggagcgaagcatcccagcagacctgaaggag
caggtggacgccatggtgtcccgtttggacgatgtgaaggtcgaggtggacggacatatc
tcaggtttggatatgctgcaggacaccgttcagcgagacaagaccgctaccgaggacctg
ctggcccagggcaaggccgccaaaaaggagttcaacaagctggtggacagagtggacgtc
gccaaggtgctgacggaggacgctctgaaaggcatcaacggcaacaccaaggagctggag
gacgccctgaatgctctgaaaggcttcgaccagcagatcggcgacagcaagtctctggcc
gacgacgccatcaaacgtcttcctggcatcaaagccaccatccagcaggcggtcagcgac
aacgcagagaccggcggcatcctgggagacgtgtctgcagattacgacagctccgtgaag
agcgccaacctgctggggaagctggtcgccgggctggagagcacgctgcggtccctgccg
cctcactccggcctgctgagccaagccaccaaactgaacaaaggctctaaggatctgaag
cagcgaaccctcgatgcaactgacaatctgaccgccgagctggagggcggccggacgctg
gagggcgaggccgagcaggcagcggacgcggcgactgcagctctgaacaacgccagaaac
accagagacggcgtggggaaaactctgagagacatcaacgccctgctggccacgatggac
cagtccactcctgtggacgagacccagcttcgggctctggaggtggctctggacggggct
caacaggaggtgcagggccgcctgaggccccgtctgagggacatggaggccggagaggag
gcgtaccgccggagactctctggcatcaacagggacatcggctccatcctgaaggacatc
gccaacctggaggacatcctggcggccgtgccctccggctgctacaacagcccccccatc
gaggaggcctga
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