Pseudochaenichthys georgianus (South Georgia icefish): 117441309
Help
Entry
117441309 CDS
T09629
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase rfwd3.S
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117441309 (rfwd3)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117441309 (rfwd3)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117441309 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
zf-RING_UBOX
zf-C3HC4
WD40
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_WDR3_1st
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
Beta-prop_EML_2
WD40_Prp19
zf-RING_Vps41
zf-C3HC4_4
WD40_2
Beta-prop_WDR3_2nd
zf-C3HC4_3
Rtf2
Beta-prop_WDR75_1st
zf-RING_11
WD40_WDHD1_1st
Beta-prop_RIG_2nd
CFAP43_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
NSRP1_N
zf-Nse
Motif
Other DBs
NCBI-GeneID:
117441309
NCBI-ProteinID:
XP_033933392
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
RGLRVHYPSQTAAPSRGFPDFLLRAPAASAAEPGSGSTTEISESEEEEEEVEWGGEEGAA
LEPVDPPAVPASPRLNARHTQPPEAAPSHSSSAAGAERTPQSSQKGFCYRLASSWKLKDP
LLAPPAPAPSSSPGDEGEGDVCSICFEPWTTAGEHRLSALRCGHLFGFTCITRWLKAQGS
AAKCPQCNKKAKRSDIVLLYAPKLRALDNSEQEILKKSLEQEQGLRRKAELESAQYKLKL
QVVTNKYGQAQQELQELRAMMAGRVPVYSSSSSSSSSLLLGLSQSSRSAQYVFSKAILVS
IAGGSRVLSYCEPLSCLLASQPSPHSTLVPGCGVKKVSVVNMKASQYVPIHSKQIRGLSF
NRQNDSLLLSAALDNTIKLTSLLTNTVVQTYNAGKPVWSCCWCLDNSNYVYAGLSNGSVL
VYDTRDTSTHVQELQPLRSRCPVASLCYVPRAASSSFPCGGLIAGSLEGGCFWEQVNETT
YRPHLLPLETAGCTDIQVETESRHCLVTYRPGRSNPSLRCVLMSLTRTPQQDSSALPQVS
VAPLQSFSAGPSGKLLTKNAVFRSPGGAGGLVCAGDEASNSTMVWDASSGSLLQKLPADL
PVLDISPFSVNGEHFLASLTEKMLKLYRWE
NT seq
1895 nt
NT seq
+upstream
nt +downstream
nt
gcaggggtctcagggtgcattaccccagccagactgcagcgccctctagaggattcccag
acttcctgctgcgagctccagctgcctcggcggctgagccgggctccggcagcaccacgg
agatcagcgagtctgaggaggaggaggaggaggtggagtgggggggggaggagggagctg
ctctggagcccgtcgaccccccggcggtgcctgctagccctcgtcttaacgcccggcaca
cacagcccccggaagccgctcccagccattccagttcggctgcaggcgctgagaggacgc
ctcaaagctcacagaaaggtttctgttatcgtctggccagcagctggaaactgaaggatc
cgctcctcgctcccccggctcccgccccctcgtcttctccgggagacgaaggcgaaggcg
acgtctgctccatctgcttcgagccgtggacgacggcaggcgagcaccgactctccgccc
tgcgctgcgggcacctgttcgggttcacctgcatcacacgctggctcaaagctcaggggt
ccgccgccaaatgtccacagtgcaacaagaaggcgaagcggtcggacatcgttctgctgt
acgcgcccaaactgagagcgctggacaactctgagcaggagatcttaaagaagtctctgg
agcaggagcagggtctgaggaggaaggctgaactggagtcagcgcagtacaaactgaagc
tgcaggtcgtgaccaacaaatacggacaagcccaacaagagctgcaggaactcagggcta
tgatggctggtcgagtcccagtttactcttcctcctcctcttcctcctcctcgctcctcc
tcggcctctctcagagctccaggtcggcgcagtatgttttctccaaagcgattctggtgt
ctattgccggaggatccagagttctgtcgtactgcgagcctctgagctgcctgctggcct
cgcagccctccccccactccactctggtgccaggctgtggggtgaagaaggtgagcgtgg
tgaacatgaaggccagtcagtacgttcccatccacagcaaacagatccgaggtctgtcct
tcaacagacagaacgacagcttgctgctttctgcggctctggacaacaccatcaaactga
ccagtctgctgaccaacacggtggtccagacctataatgccggtaagcccgtgtggagct
gctgctggtgtttggacaacagtaactacgtttacgccgggctgagcaacggctccgtgc
tcgtctacgacaccagagacaccagcacacacgtgcaggagctgcagccgctacgctcca
ggtgtccggtggcgtctctgtgctacgtcccgcgggcggcctccagctcgttcccgtgcg
gcggtttgatcgccggctctctggagggcgggtgcttttgggagcaggtgaacgagacga
cctacagacctcacctgttgcccctggagacggccggctgcaccgacatccaggtggaga
cggagagccgccactgcctcgtcacctacaggccgggccgctccaacccctctctgcgct
gcgtgctcatgtctctgacgcgcaccccccagcaggactcctccgcgctgccgcaggtct
ccgtcgctccgctgcagagcttcagcgccggcccctccggcaaactgctcaccaagaacg
ctgtgttcaggagccccggaggagcgggggggctggtctgcgccggggacgaggcctcca
actccaccatggtgtgggatgccagcagtgggtctttgcttcagaagcttccggcagatc
tcccggttttggacatttctccgttttctgtgaacggcgagcacttcctggcgtcgctca
ccgagaagatgctgaagctctacaggtgggagtga
DBGET
integrated database retrieval system
