Pseudochaenichthys georgianus (South Georgia icefish): 117441317
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Entry
117441317 CDS
T09629
Name
(RefSeq) nuclear receptor ROR-alpha A-like
KO
K08532
RAR-related orphan receptor alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117441317
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pgeo03310
]
117441317
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117441317
Nuclear receptors [BR:
pgeo03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117441317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117441317
NCBI-ProteinID:
XP_033933398
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQKSNASYSCPRQKNCM
IDRTSRNRCQHCRLQKCRTVGMSREAVKFGRMSKKQRDSLYAEVQKHLLQQQKNQEGPSL
LLTLPSIETPILGDAEQLSPLYGPPTSSVTELQDEGYMVQNSPEGGSVSLKADSGGGGRG
RGGGGRGGGGRGGGRGRGRGETQGFYLDIQPSPDQSGLDINGIKPEPLSDFNSNTGFFPL
CPLGDGDPSSLSMAELDIRSASCSTKNPPEDGVLPACRHVKHHEHRDDAGRRDVQVKLRY
MKQRNDGSLEVVLVRMCRVFDSQNNSVFFDGKFAGPDVFKALGCDDLISSVFDFAESMCS
LRLSEEELALFSAYILLSADRSWLQDKLRVEKLQQKTELALKHVLQRNQREEGALSKLRC
KVSALRSLCSRHSENLSAFRAVYPDIVRTHFPPLYRELFGGDMELNMELNMHHSDL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatttctgccatgaaagctcagattgaaatcatcccctgtaagatctgt
ggagataaatcttcggggatccactacggggtgatcacctgtgagggctgtaagggtttc
ttcagacgcagtcagaaaagtaacgccagctactcgtgtccgcgacagaaaaactgtatg
atcgaccgaacgagccgaaaccgctgccaacactgccgtctgcagaagtgtcggactgtg
ggcatgtccagagaagctgtgaagttcggccgcatgtcgaagaagcagcgggacagtctg
tacgctgaggtccagaaacacctcctccagcagcagaagaaccaggagggaccctctctc
ctcctgactctccccagcatcgagaccccgatcctgggggatgccgagcagctctccccc
ctatacggccccccgacctccagcgtcacagagctgcaggacgagggatacatggtgcaa
aactcccctgaaggagggtcagtgtctttaaaggcagactcaggaggaggaggacgagga
agaggaggaggaggaagaggaggaggaggaagaggaggaggaagaggaagaggaagagga
gaaactcagggtttctacctggacatccagccgtcccctgatcagtcgggtctcgatatt
aacggcatcaaaccggagcctctgagcgatttcaattccaacaccggcttcttcccgctc
tgccccctcggcgatggagacccttcctcactgtccatggctgaactcgacatccggtct
gcttcctgcagcacgaagaacccgccagaggacggagtgcttcctgcgtgccgccatgta
aagcatcacgagcaccgggacgacgcggggcgccgggacgttcaagtgaagctacgatac
atgaagcaaagaaacgatggctctctggaggtggtgttagtgcggatgtgtcgcgtcttc
gactctcagaacaacagcgtcttcttcgacgggaagttcgccggaccggacgtcttcaaa
gctttaggttgtgatgacttgatatcctcagtgtttgacttcgctgagagcatgtgttcg
ctgcgtctgtcggaggaagaactcgctctcttctcagcctacatcctgctctctgcagac
cgctcatggctgcaggataagcttcgggtggagaaactgcagcagaagacggagctcgct
ctgaaacacgtgctgcagagaaaccagagagaggaaggagccctgagcaagctcagatgt
aaggtgtcagcgttgcgttcgctgtgcagtcgtcactcggagaacttgtcggcgttcaga
gccgtttaccccgacatcgtgaggactcactttcctccgctgtaccgggaactgttcgga
ggagacatggagctcaacatggagctcaacatgcaccacagcgacctctga
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