Pseudochaenichthys georgianus (South Georgia icefish): 117441777
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Entry
117441777 CDS
T09629
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117441777
04121 Ubiquitin system [BR:
pgeo04121
]
117441777
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
117441777
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117441777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
hAT-like_RNase-H
DUF659
DBD_Tnp_Hermes
Myosin_tail_1
NBD94
Motif
Other DBs
NCBI-GeneID:
117441777
NCBI-ProteinID:
XP_033933684
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MVVKDSQPFSIVDDCGFKELVALLDPRYTLPSRRVLKEMVVKRYEEEKTKAKAVMQRVEA
VSLTADMWTSINMDAYLAVTCHYVDDSAKLATVLLGVLPFPEAHTAVNITAAMRSLMEEW
GTEGKVTSIVTDAGANMVASVRSLNLRHALCFAHSLNLVVKKSLDATPGLQDLRTRARKV
VTFFKTSTTAKEKLREVQEQMNRPVLKLIQEVDTRWNSTYLMLQCLFKERQSVGAALAML
KTDVRPLSSEDYETADACLQLLSPFFQATVELSEEKRVSGSKIIPMTKMLMLYLYDTIGK
TSHDIAKLLGQNMVSNMQNKFDTTESQTALTLSTLLDPRFKTIGFYNQVQAAASVKRLAA
FCTQLRKNAQPDTPTEEQPSTSAQPAPASVDNPSSTGLNLWETLDRDASEARTARNATAD
ATVEVQRYMTDPPLERSKDPLAYWVDHQNV
NT seq
1349 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaaagactcgcagcctttttccatcgtggatgactgtggcttcaaggagctt
gtggccttgcttgatcctagatacactcttccatccagacgggttctaaaggagatggtg
gtcaagcgctatgaggaggagaagacgaaggccaaggctgtcatgcagagggtagaggct
gtgagcctgactgctgatatgtggacctccattaatatggacgcatatctagccgtgacc
tgccattatgtggatgactctgcaaagctggccacagtgcttctgggagtgctgcctttc
cctgaagctcatacagcggttaacatcactgctgcaatgaggtctctcatggaggaatgg
ggcactgaaggcaaagtgacctcaattgtgacggatgcaggagcaaatatggttgcctct
gtcagaagtttaaatctaagacatgcactttgctttgctcattcacttaatttagtggtg
aagaaatctctggatgcaactcctggcctacaagacctacgcacaagggctagaaaagta
gtcacgttctttaaaaccagcacaacagcaaaagagaagctcagagaagtgcaggagcag
atgaatcgccctgtgctgaagctcattcaggaagtggacacccgctggaacagcacctac
ctaatgctacaatgccttttcaaagagaggcagtcagtgggggcagctcttgcgatgctg
aaaacagatgtgagacctctgtcctctgaagactatgaaacagcagatgcatgcctgcaa
ttgctctccccctttttccaggcaacagtggaactctccgaggagaagagagtctcagga
tccaagatcatcccaatgacgaaaatgttaatgctatacttgtacgacacaattggaaaa
acaagccacgacatagcaaaactactgggacagaacatggtgtcaaatatgcaaaacaag
tttgacaccaccgagagccaaactgcattgaccctgtcaacactgctggatcctagattc
aaaacgattggattctacaatcaagtccaggcagcggcatctgttaaacgactggcagcg
ttttgcacacaactgaggaagaacgcacaacctgacacacctacagaagaacagccctcc
acatcagctcaaccggcaccagcaagtgttgacaatccatcatccacaggtcttaacctt
tgggaaactctggacagagatgcttctgaagcgaggacagcaaggaatgccacagcagat
gctacagtggaggtgcagcggtacatgactgatccaccgctggaaagatcgaaagaccca
ctggcatactgggtggaccatcaaaatgt
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